DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13334 and MDH

DIOPT Version :10

Sequence 1:NP_610888.2 Gene:CG13334 / 36510 FlyBaseID:FBgn0033856 Length:361 Species:Drosophila melanogaster
Sequence 2:NP_190336.1 Gene:MDH / 823906 AraportID:AT3G47520 Length:403 Species:Arabidopsis thaliana


Alignment Length:400 Identity:95/400 - (23%)
Similarity:154/400 - (38%) Gaps:90/400 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IQLIRLN-MPHFRAKTWNTKAMSTKSVKSCFAKSMR-----PMKEFKRP---RIS---KISVVG- 55
            :|.::.| :|.|..  ..:.::.:.|..|..||::|     .....|:|   :|:   |::|:| 
plant    28 LQSVKFNSVPSFTG--LKSTSLISGSDSSSLAKTLRGSVTKAQTSDKKPYGFKINASYKVAVLGA 90

  Fly    56 AGQVGTAISAMLLLRNLTKNLVILDINYELAKAEALDFQHASA------FLSDARVVPCGDSTNS 114
            ||.:|..:|.::.:..|...|.:.||  ...|..|.|..|.:.      |...:.:..|     .
plant    91 AGGIGQPLSLLIKMSPLVSTLHLYDI--ANVKGVAADLSHCNTPSQVRDFTGPSELADC-----L 148

  Fly   115 KDSDVVIITAGA-RPSGKDRSRLAAMQKTVEILKKAVPKLVELSPNATFIIISNP--------AD 170
            ||.:||:|.||. |..|..|..|  ......|:|..|..:.|..|||...|||||        |:
plant   149 KDVNVVVIPAGVPRKPGMTRDDL--FNINANIVKTLVEAVAENCPNAFIHIISNPVNSTVPIAAE 211

  Fly   171 VM----TYAVQRITNLPKHRCFTTGCHLDTVRFRNLIANRLRLPPSQVHGYVIGEH-GASAVPVW 230
            |:    .|..:::..:      ||   ||.||....::.:..|....|...|||.| |.:.:|:.
plant   212 VLKKKGVYDPKKLFGV------TT---LDVVRANTFVSQKKNLKLIDVDVPVIGGHAGITILPLL 267

  Fly   231 SSVSIAGIRLNDVVKNLACGDDPENWAKINKQVTTGGLAVAKTK---GYTNWAIALTCADIVQ-- 290
            |... ..:...|           |...::..::...|..|...|   |....::|...|..|:  
plant   268 SKTK-PSVNFTD-----------EEIQELTVRIQNAGTEVVDAKAGAGSATLSMAYAAARFVESS 320

  Fly   291 --AMSGGKGKIACVGTDMKGLNGIQDNVVLSLPCL-----VTAGGISHVFELP---LTDVEQSKL 345
              |:.|......|         ...::.:..||..     :...|:..|.|..   ||:.|| |.
plant   321 LRALDGDGDVYEC---------SFVESTLTDLPFFASRVKIGKNGLEAVIESDLQGLTEYEQ-KA 375

  Fly   346 LASANILLEA 355
            |.:..:.|:|
plant   376 LEALKVELKA 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13334NP_610888.2 LDH_1 46..358 CDD:133429 84/351 (24%)
MDHNP_190336.1 PLN00106 80..389 CDD:215058 82/345 (24%)

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