DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13334 and mMDH2

DIOPT Version :10

Sequence 1:NP_610888.2 Gene:CG13334 / 36510 FlyBaseID:FBgn0033856 Length:361 Species:Drosophila melanogaster
Sequence 2:NP_188120.1 Gene:mMDH2 / 820731 AraportID:AT3G15020 Length:341 Species:Arabidopsis thaliana


Alignment Length:383 Identity:93/383 - (24%)
Similarity:155/383 - (40%) Gaps:104/383 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 KSCFAKSMRPMKE--FKRPRIS------KISVVG-AGQVGTAISAMLLLRNLTKNLVILDINYEL 85
            :|...:|..|:|:  .:|...|      |:.::| ||.:|..:|.::.|..|..:|.:    |::
plant     3 RSMIVRSASPVKQGLLRRGFASESVPDRKVVILGAAGGIGQPLSLLMKLNPLVSSLSL----YDI 63

  Fly    86 AKAE--ALDFQH------ASAFLSDARVVPCGDSTNS--KDSDVVIITAGA-RPSGKDRSRL--- 136
            |...  |.|..|      .|.::.|       |....  :.:|:|||.||. |..|..|..|   
plant    64 ANTPGVAADVGHINTRSQVSGYMGD-------DDLGKALEGADLVIIPAGVPRKPGMTRDDLFNI 121

  Fly   137 -AAMQKTVEILKKAVPKLVELSPNATFIIISNP--------ADVM----TYAVQRITNLPKHRCF 188
             |.:.|.:.|      .:.:..|.|...:||||        |::.    ||..:::..:      
plant   122 NAGIVKNLSI------AIAKYCPQALVNMISNPVNSTVPIAAEIFKKAGTYDEKKLFGV------ 174

  Fly   189 TTGCHLDTVRFRNLIANRLRLPPSQVHGYVIGEH-GASAVPVWSSVSIAGIRLNDVVKNLACGDD 252
            ||   ||.||.|...|.:..:..::|:..|:|.| |.:.:|::|..|......:|:::.|     
plant   175 TT---LDVVRARTFYAGKSDVNVAEVNVPVVGGHAGITILPLFSQASPQANLSDDLIRAL----- 231

  Fly   253 PENWAKINKQVTTGGLAVAKTKGYTNWAIALTCADIVQAMSGGKGKIACVGTDMKGLNGIQD--- 314
                   .|:...||..|.:.|.      ....|.:..|.:|.....||    :|||||:.:   
plant   232 -------TKRTQDGGTEVVEAKA------GKGSATLSMAYAGALFADAC----LKGLNGVPNVVE 279

  Fly   315 -----NVVLSLPCLVT-----AGGISHVFEL-PLTDVEQSKLLASANILLEAQCSLSI 361
                 :.:..||...:     ..|:..|.:| ||:|.|:..|.|     |:|:...||
plant   280 CSFVQSTITELPFFASKVRLGKNGVEEVLDLGPLSDFEKEGLEA-----LKAELKSSI 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13334NP_610888.2 LDH_1 46..358 CDD:133429 86/360 (24%)
mMDH2NP_188120.1 PLN00106 14..334 CDD:215058 90/372 (24%)

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