DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13334 and Mdh2

DIOPT Version :10

Sequence 1:NP_610888.2 Gene:CG13334 / 36510 FlyBaseID:FBgn0033856 Length:361 Species:Drosophila melanogaster
Sequence 2:NP_112413.2 Gene:Mdh2 / 81829 RGDID:619719 Length:338 Species:Rattus norvegicus


Alignment Length:351 Identity:89/351 - (25%)
Similarity:132/351 - (37%) Gaps:106/351 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 SKISVVGA-GQVGTAISAMLLLRN--LTKNLVILDINYELAKAEALDFQH------ASAFLSDAR 104
            :|::|:|| |.:|..:|  |||:|  |...|.:.||.:  ....|.|..|      ...:|...:
  Rat    25 AKVAVLGASGGIGQPLS--LLLKNSPLVSRLTLYDIAH--TPGVAADLSHIETRANVKGYLGPEQ 85

  Fly   105 VVPCGDSTNSKDSDVVIITAGA-RPSGKDRSRLAAMQKTVEILKKAVPKLVELSPNATFIIISNP 168
            :..|     .|..|||:|.||. |..|..|..|.....|  |:........:..|.|...|||||
  Rat    86 LPDC-----LKGCDVVVIPAGVPRKPGMTRDDLFNTNAT--IVATLTAACAQHCPEAMICIISNP 143

  Fly   169 ADVMTYAVQRITNLP-------KHRCF--------TTGCHLDTVRFRNLIANRLRLPPSQVHGYV 218
            .:         :.:|       ||..:        ||   ||.||....:|....|.|::|:..|
  Rat   144 VN---------STIPITAEVFKKHGVYNPNKIFGVTT---LDIVRANTFVAELKGLDPARVNVPV 196

  Fly   219 IGEH-GASAVPVWSSVSIAGIRLNDVVKNLACG---DDPEN-WAKINKQVTTGGLAVAKTK---G 275
            ||.| |.:.:|:.|.                |.   |.|:: .|.:..::...|..|.|.|   |
  Rat   197 IGGHAGKTIIPLISQ----------------CTPKVDFPQDQLATLTGRIQEAGTEVVKAKAGAG 245

  Fly   276 YTNWAIALTCA----DIVQAMSGGKGKIACVGTDMK-------------GLNGIQDNVVLSLPCL 323
            ....::|...|    .:|.||:|.:|.|.|.....|             |..|::.|:       
  Rat   246 SATLSMAYAGARFVFSLVDAMNGKEGVIECSFVQSKETECTYFSTPLLLGKKGLEKNL------- 303

  Fly   324 VTAGGISHVFELPLTDVEQSKLLASA 349
                ||..:     |..|: |::|.|
  Rat   304 ----GIGKI-----TPFEE-KMIAEA 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13334NP_610888.2 LDH_1 46..358 CDD:133429 89/351 (25%)
Mdh2NP_112413.2 MDH_glyoxysomal_mitochondrial 26..334 CDD:133422 89/350 (25%)

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