DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13334 and mdh1b

DIOPT Version :10

Sequence 1:NP_610888.2 Gene:CG13334 / 36510 FlyBaseID:FBgn0033856 Length:361 Species:Drosophila melanogaster
Sequence 2:XP_009303919.1 Gene:mdh1b / 767794 ZFINID:ZDB-GENE-060929-384 Length:471 Species:Danio rerio


Alignment Length:310 Identity:63/310 - (20%)
Similarity:102/310 - (32%) Gaps:100/310 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 EALDFQ--HASAFLSDARVVPCG---DSTNSKD------------------SDVVIITAG----- 125
            :.|.||  |...||.|.:  |.|   |..|.||                  .||.::.||     
Zfish   201 QMLAFQEAHFIIFLDDQQ--PAGEYNDEQNDKDQVAEHFHRYGQLIETNAQKDVRVLVAGDFFIN 263

  Fly   126 --------ARPSGKDRSRLAAMQKTVEILKKAVPKLVELSPNATFIIISNPADVMTYAVQRITNL 182
                    ..||...|:.:|   .|.::..:|..:|               |..::.....|||:
Zfish   264 MKCSLLIENAPSIDPRNFVA---MTTQLEYEARTQL---------------AQKLSVKTSDITNV 310

  Fly   183 PKHRCFTTGCHLDTVR---FRNLIANRLRLPPSQVHGYVIGEHGASAVPVWSSVSIAGIRLNDVV 244
            ......:...|:|..|   ||  ....:|.|..      ..:|....:..|              
Zfish   311 IVWGNISGSFHIDLQRAKVFR--YDGAIRGPDG------FSQHVMEMIYDW-------------- 353

  Fly   245 KNLACGDDPENWAKIN-KQVTTGGLAVAKTKGYTNWAIALTCAD----IVQAMSGGKG--KIACV 302
                      .|.|.: :.:.....|...:|  ||.|.|::..:    |::|.:..:.  ::..:
Zfish   354 ----------KWLKTDFRSLLHKHRATISSK--TNKATAISTTNAILAILKAWNNAESPEEVFSL 406

  Fly   303 GTDMKGLNGIQDNVVLSLPCLVTAGGISHVFELPLTDVEQSKLLASANIL 352
            |....|..||...:|.|:|...|.|..|...::.:||..:..|.|.|:.|
Zfish   407 GVLSTGQFGIPAGLVFSMPVSFTDGHWSVRSDVIVTDELRVNLDACADEL 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13334NP_610888.2 LDH_1 46..358 CDD:133429 63/310 (20%)
mdh1bXP_009303919.1 Rossmann-fold NAD(P)(+)-binding proteins 9..463 CDD:473865 63/310 (20%)

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