DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13334 and ldhbb

DIOPT Version :10

Sequence 1:NP_610888.2 Gene:CG13334 / 36510 FlyBaseID:FBgn0033856 Length:361 Species:Drosophila melanogaster
Sequence 2:NP_001002474.2 Gene:ldhbb / 436747 ZFINID:ZDB-GENE-040718-176 Length:355 Species:Danio rerio


Alignment Length:333 Identity:130/333 - (39%)
Similarity:201/333 - (60%) Gaps:8/333 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 KSVKSCFAKSMRPMKEFKRPRISKISVVGAGQVGTAISAMLLLRNLTKNLVILDINYELAKAEAL 91
            |.:...|:..:.|      || :|::|||.||||.|.:..:|||.|...|.::|:..:..|.|.:
Zfish    28 KLITPLFSGPLEP------PR-NKVTVVGVGQVGMACAVSVLLRELADELALVDVVEDKLKGEMM 85

  Fly    92 DFQHASAFLSDARVVPCGDSTNSKDSDVVIITAGARPSGKDRSRLAAMQKTVEILKKAVPKLVEL 156
            |.||.|.||...::|...|.:.:.:|.:|::|||.|.. :..|||..:|:.|.|.|..:|::|:.
Zfish    86 DLQHGSLFLKTPKIVSGKDYSVTANSRIVVVTAGVRQQ-EGESRLNLVQRNVNIFKHIIPQIVKY 149

  Fly   157 SPNATFIIISNPADVMTYAVQRITNLPKHRCFTTGCHLDTVRFRNLIANRLRLPPSQVHGYVIGE 221
            |||...|::|||.||:||...:::.|||||...:|.:||:.|||.|:|.||.:.||..:|:::||
Zfish   150 SPNCILIVVSNPVDVLTYVTWKLSGLPKHRVIGSGTNLDSARFRYLMAERLGIHPSSFNGWILGE 214

  Fly   222 HGASAVPVWSSVSIAGIRLNDVVKNLACGDDPENWAKINKQVTTGGLAVAKTKGYTNWAIALTCA 286
            ||.|:|||||..::||:.|..:..::....|.|||.:.:|:|......|.:.||||||||.|:.|
Zfish   215 HGDSSVPVWSGANVAGVSLQKLNPDIGKDTDRENWKETHKKVVDSAYEVIRLKGYTNWAIGLSVA 279

  Fly   287 DIVQAMSGGKGKIACVGTDMKGLNGIQDNVVLSLPCLVTAGGISHVFELPLTDVEQSKLLASANI 351
            |:.:::.....::..|.|.:||:.||.|.|.|||||::.:.|:..|..:.||..|.|:|..||::
Zfish   280 DLTESIMKNLNRVHPVSTMVKGMYGISDEVYLSLPCVLNSAGVGSVVNMTLTVDEVSQLKKSADM 344

  Fly   352 LLEAQCSL 359
            |...|..|
Zfish   345 LWHIQRDL 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13334NP_610888.2 LDH_1 46..358 CDD:133429 126/311 (41%)
ldhbbNP_001002474.2 LDH_1 55..351 CDD:133429 116/296 (39%)

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