DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13334 and Mdh2

DIOPT Version :10

Sequence 1:NP_610888.2 Gene:CG13334 / 36510 FlyBaseID:FBgn0033856 Length:361 Species:Drosophila melanogaster
Sequence 2:NP_650696.1 Gene:Mdh2 / 42185 FlyBaseID:FBgn0262559 Length:336 Species:Drosophila melanogaster


Alignment Length:325 Identity:87/325 - (26%)
Similarity:124/325 - (38%) Gaps:56/325 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 KISVVG-AGQVGTAISAMLLLRNLTKNLVILDINYELAKAEALDFQHASAFLSDARVV---PCGD 110
            |::|.| ||.:|..:|.:|....|..:|.:.||.:  ....|.|..|.......|..:   ..||
  Fly    26 KVTVCGAAGGIGQPLSLLLKQNPLVTDLALYDIVH--TPGVAADLSHIDTKSKTAGFIGADQLGD 88

  Fly   111 STNSKDSDVVIITAGA-RPSGKDRSRLAAMQKTVEILKKAVPKLVELSPNATFIIISNPADVMTY 174
            |.  |.||||:|.||. |..|..|..|  ......|:|.....:.:..|.|...||:||.:....
  Fly    89 SL--KGSDVVVIPAGVPRKPGMTRDDL--FNVNAGIIKDISNSIAKNCPKALVAIITNPVNTCVP 149

  Fly   175 AVQRITNL-----PKHRCFTTGCHLDTVRFRNLIANRLRLPPSQVHGYVIGEH-GASAVPVWSSV 233
            ....|...     || |.|.... ||.||.|..|.:.|.:.|..|...|||.| |.:.:||.|..
  Fly   150 IAAEILKKAGVYDPK-RLFGVST-LDVVRARAFIGHALGVDPQTVQIPVIGGHSGVTILPVLSQS 212

  Fly   234 SIAGIRLNDVVKNLACGDDPENWAKINKQVTTGGLAVAKTKGYTNWAIALTCADIVQAMSGGKGK 298
            ........|.::            |:..::...|..|.|.|.      ....|.:..|.:|.:  
  Fly   213 QPLFKGNQDTIE------------KLTVRIQEAGTEVVKAKA------GAGSATLSMAYAGAR-- 257

  Fly   299 IACVGTDMKGLNGIQDNVV--------------LSLPCLVTAGGISHVFELPLTDVEQSKLLASA 349
              ..|:.:||||| :.||:              .|.|.::...|:.....||..:..:.|||.:|
  Fly   258 --FAGSLLKGLNG-EKNVIECSYVQSTVTEATFFSTPLVLGKNGVQENLGLPKLNDYEKKLLEAA 319

  Fly   350  349
              Fly   320  319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13334NP_610888.2 LDH_1 46..358 CDD:133429 87/325 (27%)
Mdh2NP_650696.1 MDH_glyoxysomal_mitochondrial 25..334 CDD:133422 87/325 (27%)

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