DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13334 and MDH2

DIOPT Version :10

Sequence 1:NP_610888.2 Gene:CG13334 / 36510 FlyBaseID:FBgn0033856 Length:361 Species:Drosophila melanogaster
Sequence 2:NP_005909.2 Gene:MDH2 / 4191 HGNCID:6971 Length:338 Species:Homo sapiens


Alignment Length:341 Identity:82/341 - (24%)
Similarity:128/341 - (37%) Gaps:97/341 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 SKISVVGA-GQVGTAISAMLLLRN--LTKNLVILDINYELAKAEALDFQH------ASAFLSDAR 104
            :|::|:|| |.:|..:|  |||:|  |...|.:.||.:  ....|.|..|      ...:|...:
Human    25 AKVAVLGASGGIGQPLS--LLLKNSPLVSRLTLYDIAH--TPGVAADLSHIETKAAVKGYLGPEQ 85

  Fly   105 VVPCGDSTNSKDSDVVIITAGA-RPSGKDRSRLAAMQKTVEILKKAVPKLVELSPNATFIIISNP 168
            :..|     .|..|||:|.||. |..|..|..|.....|  |:........:..|.|...:|:||
Human    86 LPDC-----LKGCDVVVIPAGVPRKPGMTRDDLFNTNAT--IVATLTAACAQHCPEAMICVIANP 143

  Fly   169 ADVMTYAVQRITNLP-------KHRCF--------TTGCHLDTVRFRNLIANRLRLPPSQVHGYV 218
            .:         :.:|       ||..:        ||   ||.||....:|....|.|::|:..|
Human   144 VN---------STIPITAEVFKKHGVYNPNKIFGVTT---LDIVRANTFVAELKGLDPARVNVPV 196

  Fly   219 IGEH-GASAVPVWSSVSIAGIRLNDVVKNLACG---DDPEN-WAKINKQVTTGGLAVAKTK---G 275
            ||.| |.:.:|:.|.                |.   |.|:: ...:..::...|..|.|.|   |
Human   197 IGGHAGKTIIPLISQ----------------CTPKVDFPQDQLTALTGRIQEAGTEVVKAKAGAG 245

  Fly   276 YTNWAIALTCA----DIVQAMSGGKGKIACVGTD-------------MKGLNGIQDNVVLSLPCL 323
            ....::|...|    .:|.||:|.:|.:.|....             :.|..||:.|:.:     
Human   246 SATLSMAYAGARFVFSLVDAMNGKEGVVECSFVKSQETECTYFSTPLLLGKKGIEKNLGI----- 305

  Fly   324 VTAGGISHVFELPLTD 339
               |.:|...|..::|
Human   306 ---GKVSSFEEKMISD 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13334NP_610888.2 LDH_1 46..358 CDD:133429 82/341 (24%)
MDH2NP_005909.2 MDH_glyoxysomal_mitochondrial 26..334 CDD:133422 82/340 (24%)

Return to query results.
Submit another query.