DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13334 and mdh1aa

DIOPT Version :10

Sequence 1:NP_610888.2 Gene:CG13334 / 36510 FlyBaseID:FBgn0033856 Length:361 Species:Drosophila melanogaster
Sequence 2:NP_001303854.1 Gene:mdh1aa / 399662 ZFINID:ZDB-GENE-040204-1 Length:354 Species:Danio rerio


Alignment Length:348 Identity:88/348 - (25%)
Similarity:136/348 - (39%) Gaps:74/348 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 KISVVG-AGQVGTAISAMLLLRNLTKN----------LVILDINYELAKAEALDFQHASAFLSDA 103
            ::.|.| |||:     |..||.::.|.          ||:|||...|...:.:..:.....|...
Zfish     6 RVLVTGAAGQI-----AYSLLYSIAKGDVFGKDQPIILVLLDITPMLPVLDGVVMELQDCALPLL 65

  Fly   104 R-VVPCGD-STNSKDSDVVIITAG-ARPSGKDRSRL----AAMQKTV-EILKKAVPKLVELSPNA 160
            | |:|... ....||.|..|:... .|..|.:|..|    .|:.||. |.|:|...|.|::    
Zfish    66 REVIPTDKVEVGFKDLDAAILVGSMPRKEGMERKDLLKANVAIFKTQGEALEKYAKKTVKV---- 126

  Fly   161 TFIIISNPADV-MTYAVQRITNLPKHR--CFTTGCHLDTVRFRNLIANRLRLPPSQVHGYVI-GE 221
              :::.|||:. ...|.:...::||..  |.|   .||..|.|:.:|.|:.:|...|....| |.
Zfish   127 --LVVGNPANTNCLIASKSAPSIPKENFSCLT---RLDHNRARSQVAMRVGVPSDSVKNVTIWGN 186

  Fly   222 HGASAVPVWSSVSIAGIRLNDVVKNLACGD--DPENWAK--INKQVTTGGLAVAKTKGYTNWAIA 282
            |.::..|   .|..|.:..|.  |.:|..|  :.|:|.|  ....|...|.||.|.:        
Zfish   187 HSSTQYP---DVHHAIVTRNG--KEIAAFDAVNDESWLKGDFISTVQQRGAAVIKAR-------- 238

  Fly   283 LTCADIVQAMSGGK---------------GKIACVGTDMKGLN-GIQDNVVLSLPCLVTAGGISH 331
                .:..|||..|               |:...:|....|.: |:.|:::.|.|..:.......
Zfish   239 ----KLSSAMSAAKAICDHMRDIWFGTPDGEWVSMGIYSSGNSYGVPDDLMYSFPVKIKNKSWKV 299

  Fly   332 VFELPLTDVEQSKLLASANILLE 354
            |..|.:.|..:.|:.|:|..|:|
Zfish   300 VDGLSINDFSRGKMDATAAELVE 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13334NP_610888.2 LDH_1 46..358 CDD:133429 88/348 (25%)
mdh1aaNP_001303854.1 MDH_cytoplasmic_cytosolic 3..328 CDD:133421 88/348 (25%)
PTS1 352..354
Blue background indicates that the domain is not in the aligned region.

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