DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13334 and ldhb

DIOPT Version :10

Sequence 1:NP_610888.2 Gene:CG13334 / 36510 FlyBaseID:FBgn0033856 Length:361 Species:Drosophila melanogaster
Sequence 2:NP_988882.1 Gene:ldhb / 394477 XenbaseID:XB-GENE-5908187 Length:334 Species:Xenopus tropicalis


Alignment Length:328 Identity:123/328 - (37%)
Similarity:192/328 - (58%) Gaps:9/328 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 CFAKSMRPMKEFKRPRISKISVVGAGQVGTAISAMLLLRNLTKNLVILDINYELAKAEALDFQHA 96
            |..|:.:|.        :||:|||.||||.|.:..:|.::|...|.::||..:..|.|.:|.||.
 Frog    13 CQDKAAKPK--------NKITVVGVGQVGMACAVSVLQKDLCDELALVDILEDKLKGEMMDLQHG 69

  Fly    97 SAFLSDARVVPCGDSTNSKDSDVVIITAGARPSGKDRSRLAAMQKTVEILKKAVPKLVELSPNAT 161
            |.||..:.:|...|.:.:.:|.:|::|.|.|.. :..|||..:|:.|.:.|..:|::|:.||:..
 Frog    70 SLFLKTSVIVADKDYSVTANSRIVVVTGGVRQQ-EGESRLNLVQRNVNVFKFIIPQVVKYSPDCI 133

  Fly   162 FIIISNPADVMTYAVQRITNLPKHRCFTTGCHLDTVRFRNLIANRLRLPPSQVHGYVIGEHGASA 226
            .|::|||.|::||...:::.|||||...:|.:||:.|||.||..||.:.||..||:::||||.|:
 Frog   134 IIVVSNPVDILTYVTWKLSGLPKHRIIGSGTNLDSARFRYLIGERLGIHPSSCHGFILGEHGDSS 198

  Fly   227 VPVWSSVSIAGIRLNDVVKNLACGDDPENWAKINKQVTTGGLAVAKTKGYTNWAIALTCADIVQA 291
            |.|||.|::||:.|..:...:....|...|.:::|||......|.|.||||||||..:.|||:::
 Frog   199 VAVWSGVNVAGVGLQSLNPEVGSDQDSSKWKEVHKQVVDSAYEVIKLKGYTNWAIGFSVADIIES 263

  Fly   292 MSGGKGKIACVGTDMKGLNGIQDNVVLSLPCLVTAGGISHVFELPLTDVEQSKLLASANILLEAQ 356
            ::....::..|.|.:||:.||::.|.|||||::...|::.|....|.|.|..:|..||..|...|
 Frog   264 ITKNMSRVHPVSTMVKGMYGIENEVFLSLPCVLNGNGLTSVINQKLKDEEVGQLQKSAETLWGIQ 328

  Fly   357 CSL 359
            ..|
 Frog   329 KDL 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13334NP_610888.2 LDH_1 46..358 CDD:133429 119/311 (38%)
ldhbNP_988882.1 LDH_1 19..330 CDD:133429 120/319 (38%)

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