DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13334 and Mdh1

DIOPT Version :10

Sequence 1:NP_610888.2 Gene:CG13334 / 36510 FlyBaseID:FBgn0033856 Length:361 Species:Drosophila melanogaster
Sequence 2:NP_609394.1 Gene:Mdh1 / 34414 FlyBaseID:FBgn0262782 Length:337 Species:Drosophila melanogaster


Alignment Length:327 Identity:76/327 - (23%)
Similarity:129/327 - (39%) Gaps:33/327 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 KISVVG-AGQVGTAISAMLLLRNLTKN-----LVILDINYELAKAEALDFQHASAFLS-DARVVP 107
            ::.|.| |||:..::..|:....:...     |.:|||...:...|.:..:.|...|. ...|||
  Fly     6 RVVVTGAAGQIAYSLLYMIARGEVFGKDQPIVLHLLDIPPMVGVLEGVVMELADCALPLLVEVVP 70

  Fly   108 CGD-STNSKDSDVVIITAGARPSGKDRSRLAAMQKTVEILK---KAVPKLVELSPNATFIIISNP 168
            ..| :...||.....: .||.|..:...|...:...|:|.:   :|:.|..:  .:...:::.||
  Fly    71 TTDPAVGFKDVSAAFL-VGAMPRKEGMERKDLLSANVKIFRTQGQALDKFAK--KDVKVLVVGNP 132

  Fly   169 ADV-----MTYAVQRITNLPKHRCFTTGCHLDTVRFRNLIANRLRLPPSQVHGYVI-GEHGASAV 227
            |:.     .:||    .::|:.. |:....||..|..:.||.:|.:|.|.|...:| |.|.::..
  Fly   133 ANTNALVCSSYA----PSIPREN-FSAMTRLDQNRATSQIAAKLGVPISAVKNIIIWGNHSSTQY 192

  Fly   228 PVWSSVSIAGIRLNDVVKNL--ACGDDPENWAKINKQVTTGGLAV-AKTKGYTNWAIALTCADIV 289
            |   ....|.:..|..||::  |..|:........:.|...|.|| |..|..:..:.|....|.:
  Fly   193 P---DAGQAKVTANGTVKSVVDAINDNGYLQGSFVETVQKRGAAVIAARKMSSAMSAAKAACDHM 254

  Fly   290 QAMSGG--KGKIACVGTDMKGLNGIQDNVVLSLPCLVTAGGISHVFELPLTDVEQSKLLASANIL 352
            .....|  .|:...:|....|......:|:.|.|..:.......|..|.|:|..::||..:...|
  Fly   255 HDWWNGTAPGQFVSMGVFSDGSYDSPKDVIFSFPVEIKNKQWKIVSGLTLSDFAKTKLSVTGKEL 319

  Fly   353 LE 354
            .|
  Fly   320 QE 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13334NP_610888.2 LDH_1 46..358 CDD:133429 76/327 (23%)
Mdh1NP_609394.1 MDH_cytoplasmic_cytosolic 3..327 CDD:133421 76/327 (23%)

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