DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13334 and Ldhc

DIOPT Version :10

Sequence 1:NP_610888.2 Gene:CG13334 / 36510 FlyBaseID:FBgn0033856 Length:361 Species:Drosophila melanogaster
Sequence 2:NP_038608.1 Gene:Ldhc / 16833 MGIID:96764 Length:332 Species:Mus musculus


Alignment Length:339 Identity:132/339 - (38%)
Similarity:202/339 - (59%) Gaps:8/339 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 MSTKSVKSCFAKSMRPMKEFKRPRISKISVVGAGQVGTAISAMLLLRNLTKNLVILDINYELAKA 88
            |||  ||....:::.|..:..|   .||:|||.|.||.|.:..:||:.|...|.::|.:....:.
Mouse     1 MST--VKEQLIQNLVPEDKLSR---CKITVVGVGNVGMACAISILLKGLADELALVDADTNKLRG 60

  Fly    89 EALDFQHASAFLSDARVVPCGDSTNSKDSDVVIITAGAR-PSGKDRSRLAAMQKTVEILKKAVPK 152
            ||||..|.|.|||..::|...|...|.:|.:|||||||| .||:  :||..:|:.|.|:|..||.
Mouse    61 EALDLLHGSLFLSTPKIVFGKDYNVSANSKLVIITAGARMVSGE--TRLDLLQRNVAIMKAIVPG 123

  Fly   153 LVELSPNATFIIISNPADVMTYAVQRITNLPKHRCFTTGCHLDTVRFRNLIANRLRLPPSQVHGY 217
            :|:.||:...||::||.|::||.|.:|:..|..|...:||:||:.|||.||..:|.:.|:..||:
Mouse   124 IVQNSPDCKIIIVTNPVDILTYVVWKISGFPVGRVIGSGCNLDSARFRYLIGEKLGVNPTSCHGW 188

  Fly   218 VIGEHGASAVPVWSSVSIAGIRLNDVVKNLACGDDPENWAKINKQVTTGGLAVAKTKGYTNWAIA 282
            |:||||.|:||:||.|::||:.|..:...:....|.|:|..::|||..||..|...||||:|||.
Mouse   189 VLGEHGDSSVPIWSGVNVAGVTLKSLNPAIGTDSDKEHWKNVHKQVVEGGYEVLNMKGYTSWAIG 253

  Fly   283 LTCADIVQAMSGGKGKIACVGTDMKGLNGIQDNVVLSLPCLVTAGGISHVFELPLTDVEQSKLLA 347
            |:..|:.:::.....::..|.|.:||.:||::.|.||:||::...||:...::.:|..|:..|..
Mouse   254 LSVTDLARSILKNLKRVHPVTTLVKGFHGIKEEVFLSIPCVLGQSGITDFVKVNMTAEEEGLLKK 318

  Fly   348 SANILLEAQCSLSI 361
            ||:.|...|..|.:
Mouse   319 SADTLWNMQKDLQL 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13334NP_610888.2 LDH_1 46..358 CDD:133429 124/312 (40%)
LdhcNP_038608.1 LDH_1 19..329 CDD:133429 125/314 (40%)

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