DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13334 and Ldhal6b

DIOPT Version :10

Sequence 1:NP_610888.2 Gene:CG13334 / 36510 FlyBaseID:FBgn0033856 Length:361 Species:Drosophila melanogaster
Sequence 2:NP_780558.1 Gene:Ldhal6b / 106557 MGIID:2146830 Length:382 Species:Mus musculus


Alignment Length:308 Identity:117/308 - (37%)
Similarity:189/308 - (61%) Gaps:1/308 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 SKISVVGAGQVGTAISAMLLLRNLTKNLVILDINYELAKAEALDFQHASAFLSDARVVPCGDSTN 113
            :|:|:||.|.||.|.:..::.:.||..|.::|.|.|..|.|.:|.||.|.|:....:|...|...
Mouse    71 NKVSIVGTGSVGMACAIGIIAKGLTDELALVDNNEEKMKGETMDLQHGSVFMKMPNIVCSKDFRV 135

  Fly   114 SKDSDVVIITAGARPSGKDRSRLAAMQKTVEILKKAVPKLVELSPNATFIIISNPADVMTYAVQR 178
            :.:|:|||||||||.. |:.:||..:|:.|.|.|..|.::::.||....|::|||.|::|:...:
Mouse   136 TANSEVVIITAGARQE-KNETRLNLVQRNVTIFKAMVAEIIKHSPRCKIIVVSNPVDILTFVTWK 199

  Fly   179 ITNLPKHRCFTTGCHLDTVRFRNLIANRLRLPPSQVHGYVIGEHGASAVPVWSSVSIAGIRLNDV 243
            ::..||:|...:||:|||.|||.::..||.:.....||:|:||||.|:|||||.|:|||:.|.::
Mouse   200 LSGFPKNRIIGSGCNLDTARFRYMLGQRLGIHSESCHGWVLGEHGDSSVPVWSGVNIAGVPLREL 264

  Fly   244 VKNLACGDDPENWAKINKQVTTGGLAVAKTKGYTNWAIALTCADIVQAMSGGKGKIACVGTDMKG 308
            ...:....|||.|..::|:|......:.|.||||:|||.|:..||.:::.....|...|.|.::|
Mouse   265 NSAIGTSKDPEKWGDVHKEVIASAYNIIKMKGYTSWAIGLSVTDIAESILKNLRKTHPVTTKIQG 329

  Fly   309 LNGIQDNVVLSLPCLVTAGGISHVFELPLTDVEQSKLLASANILLEAQ 356
            |.||::.|.||:||::...|||.:.::.|:..|:::::.||..:.:.|
Mouse   330 LYGIKEEVFLSVPCILGESGISDIIKVKLSPTEEAQMVKSAETIWKIQ 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13334NP_610888.2 LDH_1 46..358 CDD:133429 117/308 (38%)
Ldhal6bNP_780558.1 LDH_1 70..379 CDD:133429 117/308 (38%)

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