DRSC/TRiP Functional Genomics Resources

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Protein Alignment Roe1 and grpE

DIOPT Version :10

Sequence 1:NP_610886.2 Gene:Roe1 / 36508 FlyBaseID:FBgn0014877 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_417104.1 Gene:grpE / 947097 ECOCYCID:EG10416 Length:197 Species:Escherichia coli


Alignment Length:174 Identity:57/174 - (32%)
Similarity:84/174 - (48%) Gaps:8/174 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 QPEEATEQKATESSPEVEKLTKELAAAKEQNAELMDKYKRSLADSENMRNRLNKQISDAKIFGIQ 103
            :||.:.||    ..|..||:....|...|......|...|..|:.||:|.|....|..|..|.::
E. coli    29 EPEASAEQ----VDPRDEKVANLEAQLAEAQTRERDGILRVKAEMENLRRRTELDIEKAHKFALE 89

  Fly   104 SFCKDLLEVADTLGHATQAVPKDKLSGNADLKNLYEGLTMTRASLLQVFKRHGLEPLDPINQKFD 168
            .|..:||.|.|:|..|.:...|    .|.|:..:.||:.:|..|:|.|.::.|:|.:...|...|
E. coli    90 KFINELLPVIDSLDRALEVADK----ANPDMSAMVEGIELTLKSMLDVVRKFGVEVIAETNVPLD 150

  Fly   169 PNQHEALFQKEDKTVEPNTVVEVTKLGYKLHERCIRPALVGVSK 212
            ||.|:|:...|...|.|..|:.:.:.||.|:.|.||.|:|.|:|
E. coli   151 PNVHQAIAMVESDDVAPGNVLGIMQKGYTLNGRTIRAAMVTVAK 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Roe1NP_610886.2 GrpE 70..210 CDD:271355 46/139 (33%)
2-helical coiled coil 70..120 CDD:271355 16/49 (33%)
2-helical coiled coil 140..155 CDD:271355 5/14 (36%)
grpENP_417104.1 PRK10325 1..197 CDD:182379 57/174 (33%)
2-helical coiled coil 59..106 CDD:271355 16/46 (35%)
2-helical coiled coil 122..137 CDD:271355 5/14 (36%)

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