DRSC/TRiP Functional Genomics Resources

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Protein Alignment Roe1 and MGE1

DIOPT Version :10

Sequence 1:NP_610886.2 Gene:Roe1 / 36508 FlyBaseID:FBgn0014877 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_200331.1 Gene:MGE1 / 835613 AraportID:AT5G55200 Length:302 Species:Arabidopsis thaliana


Alignment Length:224 Identity:78/224 - (34%)
Similarity:116/224 - (51%) Gaps:23/224 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LQMFGRRLVHLRSSVTSQNMSALRLYSTEKQPEEATEQKATESSPEVEKLTKE----LAAAKE-- 67
            ||.||  .....|:....|.|...:..|.:..|.....|||::..:.:.|:::    |.:.||  
plant    67 LQRFG--FFSSSSAEPKGNESNTEVPKTGETSENVEVGKATDAEIDFDDLSRDDLVKLVSEKEDL 129

  Fly    68 ---QNAELM---DKYKRSLADSENMRNRLNKQISDAKIFGIQSFCKDLLEVADTLGHATQAV--- 123
               |..::|   ||:.|:.|:.:|:.:|.|:....||.|.:|:|...||:|||.|..|:..|   
plant   130 LKVQQKDIMEMKDKFLRTYAEQQNLMDRTNRNAESAKKFAVQNFATSLLDVADNLERASSVVKES 194

  Fly   124 ------PKDKLSGNADLKNLYEGLTMTRASLLQVFKRHGLEPLDPINQKFDPNQHEALFQKEDKT 182
                  .||.......||||.||:.||...|.:||::.||...||:|:.|:||:|.|:||..|.:
plant   195 FSKIDTSKDLAGATPLLKNLLEGVEMTEKQLAEVFRKAGLVKEDPLNEPFNPNRHNAVFQVPDAS 259

  Fly   183 VEPNTVVEVTKLGYKLHERCIRPALVGVS 211
            ....|:..|.|.||.|::|.||||.|||:
plant   260 KPKGTIAHVLKSGYSLYDRVIRPAEVGVT 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Roe1NP_610886.2 GrpE 70..210 CDD:271355 59/151 (39%)
2-helical coiled coil 70..120 CDD:271355 19/52 (37%)
2-helical coiled coil 140..155 CDD:271355 6/14 (43%)
MGE1NP_200331.1 GrpE 139..287 CDD:271355 58/147 (39%)
2-helical coiled coil 139..188 CDD:271355 18/48 (38%)
2-helical coiled coil 217..232 CDD:271355 6/14 (43%)

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