DRSC/TRiP Functional Genomics Resources

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Protein Alignment Roe1 and Grpel1

DIOPT Version :10

Sequence 1:NP_610886.2 Gene:Roe1 / 36508 FlyBaseID:FBgn0014877 Length:213 Species:Drosophila melanogaster
Sequence 2:XP_063129733.1 Gene:Grpel1 / 79563 RGDID:70947 Length:230 Species:Rattus norvegicus


Alignment Length:216 Identity:103/216 - (47%)
Similarity:131/216 - (60%) Gaps:30/216 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 GRRLVHLRSSVTSQNMSALRLYSTEKQPEEATEQK---------------ATESSPEVEKLTKEL 62
            ||..|::|.|.        ||..|      ||:||               .|:.|...:.|.:|.
  Rat    27 GRPKVNIRPSP--------RLLCT------ATKQKNNGQNLEEDLGHCEPKTDPSSADKTLLEEK 77

  Fly    63 AAAKEQNAELMDKYKRSLADSENMRNRLNKQISDAKIFGIQSFCKDLLEVADTLGHATQAVPKDK 127
            ...:||..|.|:||||:|||:||:|.|..|.:.:||::|||.||||||||||.|..|||:|||::
  Rat    78 VKLEEQLKETMEKYKRALADTENLRQRSQKLVEEAKLYGIQGFCKDLLEVADILEKATQSVPKEE 142

  Fly   128 LS-GNADLKNLYEGLTMTRASLLQVFKRHGLEPLDPINQKFDPNQHEALFQKEDKTVEPNTVVEV 191
            :| .|..||:|||||.||...:.:||.:|||..||||..||||.:|||||....:..||.||..|
  Rat   143 VSNNNPHLKSLYEGLVMTEVQIQKVFTKHGLLRLDPIGAKFDPYEHEALFHTPVEGKEPGTVALV 207

  Fly   192 TKLGYKLHERCIRPALVGVSK 212
            :|:|||||.|.:|||||||.|
  Rat   208 SKVGYKLHGRTLRPALVGVVK 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Roe1NP_610886.2 GrpE 70..210 CDD:271355 82/140 (59%)
2-helical coiled coil 70..120 CDD:271355 30/49 (61%)
2-helical coiled coil 140..155 CDD:271355 6/14 (43%)
Grpel1XP_063129733.1 None

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