DRSC/TRiP Functional Genomics Resources

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Protein Alignment Roe1 and Grpel1

DIOPT Version :10

Sequence 1:NP_610886.2 Gene:Roe1 / 36508 FlyBaseID:FBgn0014877 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_077798.1 Gene:Grpel1 / 17713 MGIID:1334417 Length:217 Species:Mus musculus


Alignment Length:213 Identity:102/213 - (47%)
Similarity:133/213 - (62%) Gaps:9/213 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 AKAALP-LQMFGRRLVHLRSSVTSQNMSALRLYSTEKQPEEATEQKATESSPEVEK-LTKELAAA 65
            |:.:|| |.:..|....|..:.|.|..:...|      .|:....:.....|..:| |.:|.|..
Mouse     9 ARRSLPALALSFRPSPRLLCTATKQKNNGQNL------DEDLGHCEPKTDPPSADKTLLEEKAKL 67

  Fly    66 KEQNAELMDKYKRSLADSENMRNRLNKQISDAKIFGIQSFCKDLLEVADTLGHATQAVPKDKLS- 129
            :||..|.|:||||:|||:||:|.|..|.:.:||::|||.||||||||||.|..|||:|||:::| 
Mouse    68 EEQLRETMEKYKRALADTENLRQRSQKLVEEAKLYGIQGFCKDLLEVADILEKATQSVPKEEISN 132

  Fly   130 GNADLKNLYEGLTMTRASLLQVFKRHGLEPLDPINQKFDPNQHEALFQKEDKTVEPNTVVEVTKL 194
            .|..||:|||||.||...:.:||.:|||..||||..||||.:|||||....:..||.||..|:|:
Mouse   133 NNPHLKSLYEGLVMTEVQIQKVFTKHGLLRLDPIGAKFDPYEHEALFHTPVEGKEPGTVALVSKV 197

  Fly   195 GYKLHERCIRPALVGVSK 212
            |||||.|.:|||||||.|
Mouse   198 GYKLHGRTLRPALVGVVK 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Roe1NP_610886.2 GrpE 70..210 CDD:271355 82/140 (59%)
2-helical coiled coil 70..120 CDD:271355 30/49 (61%)
2-helical coiled coil 140..155 CDD:271355 6/14 (43%)
Grpel1NP_077798.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 37..56 3/24 (13%)
GrpE 72..213 CDD:271355 82/140 (59%)
2-helical coiled coil 72..122 CDD:271355 30/49 (61%)
2-helical coiled coil 143..158 CDD:271355 6/14 (43%)

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