DRSC/TRiP Functional Genomics Resources

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Protein Alignment Roe1 and grpel2

DIOPT Version :10

Sequence 1:NP_610886.2 Gene:Roe1 / 36508 FlyBaseID:FBgn0014877 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_001135688.1 Gene:grpel2 / 100216254 XenbaseID:XB-GENE-490766 Length:216 Species:Xenopus tropicalis


Alignment Length:185 Identity:66/185 - (35%)
Similarity:103/185 - (55%) Gaps:13/185 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 YSTEKQPEEATEQKAT-------ESSPEVEKLTKELAAAKEQNAELMDKYKRSLADSENMRNRLN 91
            |||..|...|.:|...       :.|..|..|.::....:|:..:|.::|||::|||||:|.|..
 Frog    33 YSTAAQQRSAGDQTTADDNTVDDQQSYAVRALERKALKLEEEVRDLSERYKRAIADSENVRKRTQ 97

  Fly    92 KQISDAKIFGIQSFCKDLLEVADTLGHATQAVPKDKLSGNADLKNLYEGLTMTRASLLQVFKRHG 156
            |.:.|||:|||||||:||:|||||:..|.:...|:.:...|.:.:..:|      .|..||.:||
 Frog    98 KFVEDAKLFGIQSFCRDLVEVADTIEQAVEKATKEGIRDMAAVLSHLDG------KLQGVFIKHG 156

  Fly   157 LEPLDPINQKFDPNQHEALFQKEDKTVEPNTVVEVTKLGYKLHERCIRPALVGVS 211
            |:.:.|:..::||..||.:........:|.::..::..|||||.|.||.|.||::
 Frog   157 LQKMTPLEGEYDPYDHEIVCHVPADGKKPGSIATISLDGYKLHGRTIRHAQVGIA 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Roe1NP_610886.2 GrpE 70..210 CDD:271355 55/139 (40%)
2-helical coiled coil 70..120 CDD:271355 29/49 (59%)
2-helical coiled coil 140..155 CDD:271355 4/14 (29%)
grpel2NP_001135688.1 GrpE 76..210 CDD:271355 55/139 (40%)
2-helical coiled coil 76..126 CDD:271355 29/49 (59%)

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