DRSC/TRiP Functional Genomics Resources

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Protein Alignment mip120 and Tesmin

DIOPT Version :10

Sequence 1:NP_001163143.1 Gene:mip120 / 36499 FlyBaseID:FBgn0033846 Length:952 Species:Drosophila melanogaster
Sequence 2:NP_001012069.2 Gene:Tesmin / 309142 RGDID:1309788 Length:475 Species:Rattus norvegicus


Alignment Length:535 Identity:151/535 - (28%)
Similarity:225/535 - (42%) Gaps:157/535 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   453 AASPA--AASK------ANLAMGNT--NKIVMRSMG---GSIVP------LPSVQTLVSKRALGA 498
            |.|||  ||.:      |:..:|.|  .:.::|::.   |:.||      .|.:..|.|      
  Rat    32 ALSPAGGAADRDELPVLADAYLGATEPGEPLLRALSPPPGAEVPAALLGDFPGLPELRS------ 90

  Fly   499 ISNASKPASAAS----SSATPSASQE--LPRKHRLTDLNVQLKQSAS--VSSEASDSSDAGPEAK 555
             |:.:.|..|.|    ||..|.|...  ||....:..:.|::|::..  ..|...|::...|.|:
  Rat    91 -SDDAAPPPAYSVHVLSSLLPGARGPALLPLSAGVRVIPVEIKEAGGGVPGSSPEDAAFQAPLAQ 154

  Fly   556 KPRYVITMQQGSQKAASQPVQKLINRTANVQRVVSSSTSPSSNSTKKIYNYVQPTGSNGAKYMIC 620
            :.....:..|.:::|:..|.:|              .:||......|           |...|:|
  Rat   155 ESCCKFSSSQEAEEASGCPRKK--------------DSSPMVICQLK-----------GGAQMLC 194

  Fly   621 NSGVPQSSTSAMRRGYTGYVENKTRRPPPISPQQHRFKQMGPQQQSKHQQLQAQAKQRIRQQQLP 685
                               ::|...|                :.::.|...|...:....|.:||
  Rat   195 -------------------IDNCGAR----------------ELKALHLLPQYDDQSSFPQSELP 224

  Fly   686 TEQST------PIKVEPKLPT------LPPGVKANVPAKPLFEVLKPPATAAAAGAVDPLGGMTS 738
            ...:|      |:..:..|.|      ||..|  |..|.|....|:.|...|.||          
  Rat   225 KPMTTLVGRLLPVPAKLNLITQVDNGALPSAV--NGAAFPSGPALQGPPKIALAG---------- 277

  Fly   739 RRKHCNCSKSQCLKLYCDCFANGEFCQDCTCKDCFNNLDYEVERERAIRSCLDRNPSAFKPKITA 803
                           |||||::|:||..|:|    |||.:|:||.:||::||||||.||:||:..
  Rat   278 ---------------YCDCFSSGDFCNSCSC----NNLRHELERFKAIKACLDRNPEAFQPKMGK 323

  Fly   804 PNSGDMRL-HNKGCNCKRSGCLKNYCECYEAKIPCSSICKCVGCRNMEDRPDVDMDSLDGLMGV- 866
            ...|..:| |:||||||||||||||||||||||.|||||||:.|:|.|:.|:..|     ||.. 
  Rat   324 GRLGAAKLRHSKGCNCKRSGCLKNYCECYEAKITCSSICKCIACKNYEESPERKM-----LMSTP 383

  Fly   867 ---------EGQKKDKAK---NKQLNENR-ANIYFTDDVIEATIMCMISRIVMHEKQNVAVEDME 918
                     .......||   ..:|.:|| |....:.:|:|||..|::::....|::..:....|
  Rat   384 HYMEPGDFESSHHLSPAKFSGPPRLRKNRQAFSCISWEVVEATCACLLAQGEEAEQERCSPSLAE 448

  Fly   919 REVMEEMGESLTQII 933
            :.|:||.|..|:||:
  Rat   449 QMVLEEFGRCLSQIL 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mip120NP_001163143.1 TCR 740..775 CDD:461001 10/34 (29%)
TCR 813..850 CDD:461001 31/36 (86%)
TesminNP_001012069.2 TCR 334..371 CDD:461001 31/36 (86%)

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