Protein Alignment mip120 and lin-54

DIOPT Version :10

• Sequence 1: NP_001163143.1
• Gene: mip120 / 36499
• FlyBaseID: FBgn0033846
• Length: 952
• Species: Drosophila melanogaster
• Sequence 2: NP_502544.1
• Gene: lin-54 / 178280
• WormBaseID: WBGene00003037
• Length: 435
• Species: Caenorhabditis elegans
• Alignment Length: 441
• Identity: 141/441 - (31%)
• Similarity: 195/441 - (44%)
• Gaps: 127/441 - (28%)

  Fly   577 KLINRTANVQRVVSSSTSPSSNSTKKIYNYVQPTGSNGAKYMICNSGVPQS---STSAMRRGYTG 638
            :|:....|:|   :....|.::|..:.:|          :.|..|.|:.:.   .||:.|    .
 Worm    36 QLVPHNPNLQ---AQQNRPGTSSMIQQHN----------RSMEVNQGLVKDEPIDTSSHR----V 83

  Fly   639 YVENKTRRPPPISPQQHRFKQMGPQQQSKHQ-------QLQAQAKQRIRQQQLPTEQSTPIKVEP 696
            ||      ||| .|.|.:..|.||......|       .|........||     ..|.|..|:|
 Worm    84 YV------PPP-RPVQRKLFQPGPSTPGSSQYTVRNLSNLSGSPSMYDRQ-----PASLPRTVQP 136

  Fly   697 KLPTLPPGVK-----------------ANVPAKPLFEVLKPPATAAAAGAVDPLGGMTSRRKHCN 744
            .      |::                 :::..|...:|..|                 .:||.||
 Worm   137 M------GLEMGNSEQRKVYIDMKDHVSHIRLKTKKKVFAP-----------------GQRKPCN 178

  Fly   745 CSKSQCLKLYCDCFANGEFCQDCTCKDCFNNLDYEVERERAIRSCLDRNPSAFKPKITAPNSG-- 807
            |:||||||||||||||||||:||.||||.||::|:.:|.:|||..|:|||:||||||.....|
 Worm   179 CTKSQCLKLYCDCFANGEFCRDCNCKDCHNNIEYDSQRSKAIRQSLERNPNAFKPKIGIARGGIT 243

  Fly   808 DM-RLHNKGCNCKRSGCLKNYCECYEAKIPCSSICKCVGCRNME-------DRPDVDMDSLDGLM 864
            |: |||.|||:||:||||||||||||||:||:..|||.||:|.|       ......:.:.:.||
 Worm   244 DIERLHQKGCHCKKSGCLKNYCECYEAKVPCTDRCKCKGCQNTETYRMTRYKNSGGAVSNTNALM 308

  Fly   865 GVEGQKK----DKAKNKQLNENRAN----------------------IYFTDDVIEATIMCMISR 903
            .:.....    |......:.:...:                      .|.||:|:||..|||:::
 Worm   309 SLTNASSTATPDSGPGSVVTDEHGDDYEDMLLSHKPKVEMDPRRFPWYYMTDEVVEAATMCMVAQ 373

  Fly   904 ---IVMHEKQNVAVED-----MEREVMEEMGESLTQIIAFAKEKQETSQID 946
               .:.:||  |..||     ||:.|:.|.|..|.|:|....|.  |..:|
 Worm   374 AEEALNYEK--VQTEDEKLINMEKLVLREFGRCLEQMITNTTEL--TQDLD 420

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
mip120	NP_001163143.1	TCR	740..775	CDD:461001	29/34 (85%)
		TCR	813..850	CDD:461001	27/36 (75%)
lin-54	NP_502544.1	TCR	174..209	CDD:461001	29/34 (85%)
		TCR	250..287	CDD:461001	27/36 (75%)