DRSC/TRiP Functional Genomics Resources

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Protein Alignment mip120 and tesmin

DIOPT Version :9

Sequence 1:NP_001163143.1 Gene:mip120 / 36499 FlyBaseID:FBgn0033846 Length:952 Species:Drosophila melanogaster
Sequence 2:XP_017209794.1 Gene:tesmin / 100330665 ZFINID:ZDB-GENE-131121-605 Length:350 Species:Danio rerio


Alignment Length:357 Identity:119/357 - (33%)
Similarity:174/357 - (48%) Gaps:101/357 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   591 SSTSPSSNSTKKIYNYVQPTGSNGAKYMICNSGVPQS-STSAMRRGYTGYVENKTRRPPPISPQQ 654
            |.:.|:.:...:.::..:|....|...||.::..||: ||||             .....:||:.
Zfish    68 SVSMPAQSFFSEHHSPHEPGSDIGHIEMIVSAEAPQTHSTSA-------------EVTVSLSPEH 119

  Fly   655 H--RFKQ-MGPQQQSKHQQLQAQAKQRIRQQQLPTEQSTPIKVEPKLPTLPPGVKANVPAKPLFE 716
            :  :|.| :.|.|..:|:::            :.|:....:|.|                     
Zfish   120 YVSQFNQTLYPTQAFEHEEV------------VQTKGCESVKWE--------------------- 151

  Fly   717 VLKPPATAAAAGAVDPLGGMTSRRKHCNCSKSQCLKLYCDCFANGEFCQDCTCKDCFNNLDYEVE 781
                                 ..::.|||:|||||||||:||||||||..|.|.:||||.::..|
Zfish   152 ---------------------KSKRPCNCTKSQCLKLYCECFANGEFCSSCKCTNCFNNTEHVFE 195

  Fly   782 RERAIRSCLDRNPSAFKPKITAPNSGDMR-LHNKGCNCKRSGCLKNYCECYEAKIPCSSICKCVG 845
            |.:|:::||||||.||:|||.:...|::: .|.||||||||||||||||||||||.|:|.|||||
Zfish   196 RSQAVKACLDRNPGAFRPKIGSRKQGNVKGCHTKGCNCKRSGCLKNYCECYEAKIMCTSTCKCVG 260

  Fly   846 CRNMEDRPDVDMDSLDGLMGVEGQKKDKAKNKQLNENRANIYF---------TDDVIEATIMCMI 901
            |||.::..|:                    .|...::|.:|||         |.||:|||..|::
Zfish   261 CRNYDEGCDM--------------------KKSSEQDRHDIYFPTRCPVSVITRDVVEATCGCLL 305

  Fly   902 SRIVMHEKQNVAVEDMEREVMEEMGESLTQII 933
            ::....:|........||.::||.|:.||||:
Zfish   306 AQAEEAQKDGHIAAHAERMILEEFGQCLTQIV 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mip120NP_001163143.1 TCR 740..775 CDD:281618 24/34 (71%)
TCR 813..850 CDD:281618 32/36 (89%)
tesminXP_017209794.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 81 1.000 Domainoid score I8446
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003047
OrthoInspector 1 1.000 - - otm25881
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12446
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1765
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
66.010

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