Protein Alignment Rnf150 and rnf150b

DIOPT Version :10

• Sequence 1: NP_001178022.1
• Gene: Rnf150 / 364983
• RGDID: 1304572
• Length: 437
• Species: Rattus norvegicus
• Sequence 2: NP_001017554.1
• Gene: rnf150b / 792211
• ZFINID: ZDB-GENE-050417-470
• Length: 419
• Species: Danio rerio
• Alignment Length: 430
• Identity: 296/430 - (68%)
• Similarity: 346/430 - (80%)
• Gaps: 16/430 - (3%)

  Rat     1 MTMSLIQACRSLALSTWLLSFCFVHLLCLDFTVAEKEEWYTAFVNITYTEPESGAAVAGGGGGAE 65
            |.:|:|||||||||||||||||||||||||||||||||||||||||||.:|::          ||
Zfish     1 MALSVIQACRSLALSTWLLSFCFVHLLCLDFTVAEKEEWYTAFVNITYVDPDT----------AE 55

  Rat    66 LHTEKSECGRYGEHSPKQDARGEVVMASSVHDRLACDPNTKFAAPAHGKHWIALIPKGNCTYRDK 130
            :.|||:|||||||||.|::|||.:.|.::.|||.||||:.:|...|||. |||||.:|||||:||
Zfish    56 VRTEKTECGRYGEHSLKREARGVLAMPAAPHDRHACDPSGRFTPRAHGA-WIALISRGNCTYKDK 119

  Rat   131 IRNAFLQNASAVVIFNVG-SNTNETITMPHAGVEDIVAIMIPEPKGKELVSLLERNVTVTMYITI 194
            ||:|...||||||||||| ||.||||||||.|:.|:||||||||||:|||.|:|||:||.|:|||
Zfish   120 IRHAVGHNASAVVIFNVGSSNPNETITMPHQGISDVVAIMIPEPKGRELVLLMERNITVHMHITI 184

  Rat   195 GTRNLQKYVSRTSVVFVSISFIVLMIISLAWLVFYYIQRFRYANARDRNQRRLGDAAKKAISKLQ 259
            ||||||||||||||||||||||:|||||||||||||||||||||||||||||||||||||||:||
Zfish   185 GTRNLQKYVSRTSVVFVSISFIILMIISLAWLVFYYIQRFRYANARDRNQRRLGDAAKKAISQLQ 249

  Rat   260 VRTIRKGDKETESDFDNCAVCIEGYKPSDVVRILPCRHLFHKSCVDPWLLDHRTCPMCKMNILKA 324
            ||||||||:||||||||||||||||||:||||||||||||||.||||||:|||||||||||||||
Zfish   250 VRTIRKGDQETESDFDNCAVCIEGYKPNDVVRILPCRHLFHKCCVDPWLVDHRTCPMCKMNILKA 314

  Rat   325 LGIPPNADCMDDLPIDFEGSLGGPPTNQITGASDTTVNESSVTLDPAVRTVGALQVVQDPDPAPQ 389
            ||:..:|:|:::||:|:|.::||...|.:..:.|....:.....||.||..|..||:.|.:|..|
Zfish   315 LGLTSSAECLNELPLDYELAVGGVALNAMVMSDDVMAGDVGGARDPGVRMGGLPQVLLDSEPLSQ 379

  Rat   390 EGEAIFTTNSDQEPAVSSDSDISLIMALEVGLSDVELSTD 429
              :.:.|..|:.:|..|..||:||...  .|.||::..||
Zfish   380 --DTMPTEQSELQPIASGSSDVSLTTG--AGHSDIDTPTD 415

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rnf150	NP_001178022.1	PA_GRAIL_like	45..192	CDD:239037	93/147 (63%)
		RING-H2_RNF150	269..323	CDD:438456	50/53 (94%)
rnf150b	NP_001017554.1	PA_GRAIL_like	45..182	CDD:239037	93/147 (63%)
		HRD1	<192..>308	CDD:227568	109/115 (95%)
		RING-H2_RNF150	259..313	CDD:438456	50/53 (94%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	374..419		15/46 (33%)