DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rnf150 and Rnf150

DIOPT Version :10

Sequence 1:NP_001178022.1 Gene:Rnf150 / 364983 RGDID:1304572 Length:437 Species:Rattus norvegicus
Sequence 2:XP_017168354.1 Gene:Rnf150 / 330812 MGIID:2443860 Length:450 Species:Mus musculus


Alignment Length:450 Identity:427/450 - (94%)
Similarity:431/450 - (95%) Gaps:13/450 - (2%)


- Green bases have known domain annotations that are detailed below.


  Rat     1 MTMSLIQACRSLALSTWLLSFCFVHLLCLDFTVAEKEEWYTAFVNITYTEPESGAAVAGGGGGAE 65
            ||||||||||||||||||||||||||||||||||||||||||||||||.|||.||||||.|||||
Mouse     1 MTMSLIQACRSLALSTWLLSFCFVHLLCLDFTVAEKEEWYTAFVNITYLEPEPGAAVAGSGGGAE 65

  Rat    66 LHTEKSECGRYGEHSPKQDARGEVVMASSVHDRLACDPNTKFAAPAHGKHWIALIPKGNCTYRDK 130
            |||||||||||||||||||||||||||||..||||||||||||||||||||||||||||||||||
Mouse    66 LHTEKSECGRYGEHSPKQDARGEVVMASSAQDRLACDPNTKFAAPAHGKHWIALIPKGNCTYRDK 130

  Rat   131 IRNAFLQNASAVVIFNVGSNTNETITMPHAGVEDIVAIMIPEPKGKELVSLLERNVTVTMYITIG 195
            |||||||||||||||||||||||||||||||||||||||||||||||:|||||||:|||||||||
Mouse   131 IRNAFLQNASAVVIFNVGSNTNETITMPHAGVEDIVAIMIPEPKGKEIVSLLERNITVTMYITIG 195

  Rat   196 TRNLQKYVSRTSVVFVSISFIVLMIISLAWLVFYYIQRFRYANARDRNQ-------------RRL 247
            |||||||||||||||||||||||||||||||||||||||||||||||||             |||
Mouse   196 TRNLQKYVSRTSVVFVSISFIVLMIISLAWLVFYYIQRFRYANARDRNQYTIATGQDWQLYRRRL 260

  Rat   248 GDAAKKAISKLQVRTIRKGDKETESDFDNCAVCIEGYKPSDVVRILPCRHLFHKSCVDPWLLDHR 312
            |||||||||||||||||||||||||||||||||||||||:|||||||||||||||||||||||||
Mouse   261 GDAAKKAISKLQVRTIRKGDKETESDFDNCAVCIEGYKPNDVVRILPCRHLFHKSCVDPWLLDHR 325

  Rat   313 TCPMCKMNILKALGIPPNADCMDDLPIDFEGSLGGPPTNQITGASDTTVNESSVTLDPAVRTVGA 377
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   326 TCPMCKMNILKALGIPPNADCMDDLPIDFEGSLGGPPTNQITGASDTTVNESSVTLDPAVRTVGA 390

  Rat   378 LQVVQDPDPAPQEGEAIFTTNSDQEPAVSSDSDISLIMALEVGLSDVELSTDQDCEEVKS 437
            ||||||||||||||||||||||.||||:||||||||||||||||||||||||||||||||
Mouse   391 LQVVQDPDPAPQEGEAIFTTNSGQEPALSSDSDISLIMALEVGLSDVELSTDQDCEEVKS 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rnf150NP_001178022.1 PA_GRAIL_like 45..192 CDD:239037 139/146 (95%)
RING-H2_RNF150 269..323 CDD:438456 52/53 (98%)
Rnf150XP_017168354.1 PA_GRAIL_like 45..192 CDD:239037 139/146 (95%)
RING-H2_RNF150 282..336 CDD:438456 52/53 (98%)

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