Protein Alignment Rnf150 and SPCC4G3.12c

DIOPT Version :9

• Sequence 1: NP_001178022.1
• Gene: Rnf150 / 364983
• RGDID: 1304572
• Length: 437
• Species: Rattus norvegicus
• Sequence 2: NP_587826.1
• Gene: SPCC4G3.12c / 2539364
• PomBaseID: SPCC4G3.12c
• Length: 821
• Species: Schizosaccharomyces pombe
• Alignment Length: 94
• Identity: 32/94 - (34%)
• Similarity: 48/94 - (51%)
• Gaps: 15/94 - (15%)

  Rat   247 LGDAAKKAISKLQVRTIRKG------DKETESDFDNCAVCIEGYKPSDVVRIL-PCRHLFHKSCV 304
            ||.|.|...|...|:  |.|      |..:.|..|:|.:|:|.|...|:.|.| .|:|.||::|:
pombe   732 LGPAKKPVASHEDVK--RSGGLFAYFDDASLSSADSCLICLETYTNGDICRKLQACKHFFHQACI 794

  Rat   305 DPWL-LDHRTCPMCKMNILKALGIPPNAD 332
            |.|| ..:.:||:|     :|.|:...|:
pombe   795 DQWLTTGNNSCPLC-----RAHGVTTQAE 818

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rnf150	NP_001178022.1	PA_GRAIL_like	45..192	CDD:239037
		UPF0233	<206..>231	CDD:299753
		zf-RING_2	275..318	CDD:290367	18/44 (41%)
SPCC4G3.12c	NP_587826.1	zf-RING_2	764..809	CDD:290367	19/49 (39%)
		zf-rbx1	<764..809	CDD:289448	19/49 (39%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	55	1.000	Domainoid score	I3559
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.910