DRSC/TRiP Functional Genomics Resources

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Protein Alignment mars and Dlgap1

DIOPT Version :9

Sequence 1:NP_001163142.1 Gene:mars / 36498 FlyBaseID:FBgn0033845 Length:921 Species:Drosophila melanogaster
Sequence 2:NP_075235.3 Gene:Dlgap1 / 65040 RGDID:620223 Length:992 Species:Rattus norvegicus


Alignment Length:845 Identity:164/845 - (19%)
Similarity:292/845 - (34%) Gaps:229/845 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQRHKELYK------EQSLVLSPRNHCQENR---------DRLQAARAKKREDCFYQNRIIS--- 47
            :.|.:|:|:      :|::|.|  ..||:.|         |.......:.::|.....|:.|   
  Rat   291 VSRAREVYQKASVNMDQAVVKS--EACQQERSCQYLQVPQDEWTGYTPRGKDDEIPCRRMRSGSY 353

  Fly    48 -------------VSPTPVKIKQLAAAQAALTQENVAPKLESPERLDTKPAELLKESNPKVS-RQ 98
                         .||.|       :.:.|..:|:.. |...|...:....::..|.:||:. |.
  Rat   354 IKAMGDEDSGDSDTSPKP-------SPKVAARRESYL-KATQPSLTELTTLKISNEHSPKLQIRS 410

  Fly    99 KLYLQRYMEWKIAKTKEHKQQDQKRRGAAINVPTVKQSKALPKSQTF-RVPDNLASAKQKEAAPM 162
            ..||:...|..|     ::..|.......:..|     |...::::: |....::...:.|....
  Rat   411 HSYLRAVSEVSI-----NRSLDSLDPAGLLTSP-----KFRSRNESYMRAMSTISQVSEMEVNGQ 465

  Fly   163 FQPPKRCSLYMIANPTGKGKAAEPIKPSIPKPTSAAAPPSSNTVAASSALARHKSAASATKIVPA 227
            |:     |:........:.:|.|.:  .:|.|                ...|.:|.:....|...
  Rat   466 FE-----SVCESVFSELESQAVEAL--DLPMP----------------GCFRMRSHSYVRAIEKG 507

  Fly   228 IRQNNNPVALARQKAAARPIPNTTKQTTSVR--QPGIEAKKITTTIPRPTPATVTKAKTPGIRQQ 290
            ..|::..|:|   ::::.|     :.||:||  |......|:::.:...:..|..| |||     
  Rat   508 CSQDDECVSL---RSSSPP-----RTTTTVRTIQSSTGVIKLSSAVEVSSCITTYK-KTP----- 558

  Fly   291 PPVVSTKPRLPEPPAPRTARLPNVLSKPFEKPLGNKAPVTRRANVVKPQPIRGGGGAAAKFKDTA 355
                        ||.|     |...:|||       ..:|.:::....|.         .:.|..
  Rat   559 ------------PPVP-----PRTTTKPF-------ISITAQSSTESAQD---------AYMDGQ 590

  Fly   356 GATSKAASHSIRMKATKIKSQYTRLQDNVRKLPQLKA--ELLHAATLDIPPLTPLDDIHNPFIDQ 418
            |......|.|             .|.::...|..:||  ..:.||..         .||.|....
  Rat   591 GQRGDMISQS-------------GLSNSTESLDSMKALTAAIEAANA---------QIHGPASQH 633

  Fly   419 -------ATSTQCKSNNSSGHLLEAFGDTILLSPVAPVKAEGESSVKRQLLPEGKKEASGPVAKK 476
                   .|:|...:..::....:.|.....||....|....||....:.....|.::.|...::
  Rat   634 MGSNAAAVTTTTTIATVTTEDRKKDFKKNRCLSIGIQVDDAEESEKMAESKTSSKFQSVGVQVEE 698

  Fly   477 KFDFTRYSVANS--------------------PAEDSLILDPQQTTVKEDTGDSTLVPEGT---- 517
            :..|.|::.:||                    ..||:....|.......|...||:..:|:    
  Rat   699 EKCFRRFTRSNSVTTAVQADLDFHDNLENSLESIEDNSCPGPMARQFSRDASTSTVSIQGSGNHY 763

  Fly   518 ---KTPPRRESNGMPNYLSPFVSVSRGKVNSRCEKEKRNSFYLSNEESPLE-VRRAI--ESVLYF 576
               ......:::..|:.|.|                 .:.:..|..|.||| |:|::  ....:|
  Rat   764 HACAADDDFDTDFDPSILPP-----------------PDPWIDSITEDPLEAVQRSVCHRDGHWF 811

  Fly   577 RLQLENEITRLQALCAEWEAYSKENEARLQETGGIDMINVTIGQTRLLTTKKMMQFSGLIDRCEA 641
            ...|:.|..|::..|.:.|...:||.......|   .|...:|..:||..:|..||..|   || 
  Rat   812 LKLLQAERDRMEGWCKQMEREERENNLPEDILG---KIRTAVGSAQLLMAQKFYQFREL---CE- 869

  Fly   642 GATGKNSQPNDGSEDSKPVQAEDLEGWWDMLRLQSENVDKRFDNLKRWKANDWLDPDAV-AEEPK 705
                :|..||   ...:|. ::||.|:||||:|..||:..:||.|.:.|||:|...|.: .:|.:
  Rat   870 ----ENLNPN---AHPRPT-SQDLAGFWDMLQLSIENISMKFDELHQLKANNWKQMDPLDKKERR 926

  Fly   706 QPKPKPK--------ISRNMKIKSKAKPSSNLQQFLRKAHANMKKTKVEE--PTLEDGLPATSSR 760
            .|.|.||        :.|...::|..:..:..:....|..|::::....|  .::|..:|...:|
  Rat   927 APPPVPKKPAKGPAPLIRERSLESSQRQEARKRLMAAKRAASVRQNSATESAESIEIYIPEAQTR 991

  Fly   761  760
              Rat   992  991

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
marsNP_001163142.1 GKAP <558..>703 CDD:281368 48/148 (32%)
Dlgap1NP_075235.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 154..209
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 355..375 3/26 (12%)
GKAP 660..992 CDD:397439 82/364 (23%)
Interaction with DYL2. /evidence=ECO:0000269|PubMed:14760703 665..676 3/10 (30%)
Interaction with DYL2. /evidence=ECO:0000269|PubMed:14760703 687..698 2/10 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 914..980 12/65 (18%)
PDZ-binding 990..992 1/2 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3971
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12353
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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