DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mars and dlgap3

DIOPT Version :10

Sequence 1:NP_610878.1 Gene:mars / 36498 FlyBaseID:FBgn0033845 Length:921 Species:Drosophila melanogaster
Sequence 2:NP_001038179.1 Gene:dlgap3 / 557556 ZFINID:ZDB-GENE-060503-413 Length:1059 Species:Danio rerio


Alignment Length:762 Identity:154/762 - (20%)
Similarity:267/762 - (35%) Gaps:174/762 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 KRRGAAINVPTVKQSKALPKS------QTFRVPDNLASAKQKEAAPMFQPPKRCS-LYMIANPTG 179
            |..|...:|.:....||.|||      :.||   ...|..|:.:.......|:|: .|..:..|.
Zfish   383 KAMGDDDSVDSDTSPKASPKSALIAQREAFR---RSVSMDQRSSTTSKYSCKQCTDAYPNSRTTP 444

  Fly   180 KGKAAEPIKPSIPKPTSAAAPPSSNTVAASSALARHKSAASATKIVPAIRQNNNPVALARQKAAA 244
            ||.|..  :......|||....:.|......:     .|..|..:....|..::....|.|...:
Zfish   445 KGHARS--RSYTRSLTSAQLGDTLNLFGEMES-----QAVEALDLPGCFRTRSHSYVRAIQAGCS 502

  Fly   245 RPIPNTTKQTTSVRQPGIEAKKI--TTTIPRPTPATVTKAKTPGIRQ---------------QPP 292
            :.....:..:.||.|..::.:.:  ....|.|.|..::|.......|               ||.
Zfish   503 QDDDCLSVFSMSVPQASMKGEAVFPYRKGPPPLPPRMSKPMISVTAQSSTESTQDAYFQSTGQPA 567

  Fly   293 VVSTKPR-------LPEPPAPRTARLPNVLSKPFEKPLGNKAPVTRRANVVK------------- 337
            :|  :||       |.|....||:|..:.|.       |..|.|.:.:|..:             
Zfish   568 LV--RPRQHSNSVDLTENSGGRTSRGGHYLG-------GGTARVRQSSNSAESLNGRALQSIAYH 623

  Fly   338 --PQPIR------------GGGGAAAKFKDTAGATSKAASHSIRM-KATKIKSQYTRLQDNVRKL 387
              |.|::            |..|:..:...:.|.::....:|:.: ||..:..::.:.....:..
Zfish   624 SGPGPMKPKHSSSADNLLEGPRGSRDRVGGSLGKSASLPQNSMSLAKALTVGEEFKQEGRGRKWR 688

  Fly   388 PQLKAELLHAATL--DIPPLTPLDDIHNPFI---DQATSTQCKSNNSSGHLLEAFGDTILLSPVA 447
            |.:..::..:.||  ..|....|.::|:..:   |.....:.|.:||           :..|..|
Zfish   689 PSIAVQVDSSETLSDSDPEGKALREVHSIGVQVEDDKRRARFKRSNS-----------VTASVQA 742

  Fly   448 PVKAEGESSVKRQLLPEG-------KKEASGPVAKKKFDFTRYSVANSPAEDSLILDPQQTTVKE 505
            .::.||...:......:|       ::.:|.|.:..:|           ||...:....|...:|
Zfish   743 DLETEGFGGLTVPTQDKGLQFGCSFQRHSSEPESASQF-----------AEYRTVHTQGQWAYRE 796

  Fly   506 DTGDSTLVPEGTKTPPRRESNGMPNYLSPFVSVSRGKVNSRCEKEKRNSFYLSNEESPLEVRRAI 570
            |.........|   ||  |...:|...||........|....|..:  |...|...||     .:
Zfish   797 DYHSGYTTEPG---PP--ELRALPRSHSPLPLAPERGVGGWSEGPR--SLPDSGRASP-----CL 849

  Fly   571 ESVLYFRLQLENEITRLQALCAEWEAYSKENEARLQETGGIDMINVTIGQTRLLTTKKMMQFSGL 635
            ....:|...|:.|:.|::..|...|..::.||  |.|. .:::|...:|..::|.::::.||..:
Zfish   850 RDGEFFLRLLQTEVERMEGWCQNMEREAETNE--LPEE-VLELIRGAVGSAQMLMSQRVQQFFRM 911

  Fly   636 IDRCEAGATGKNSQPNDGSEDSKPVQAEDLEGWWDMLRLQSENVDKRFDNLKRWKANDWLDPDAV 700
               |:        |..|.|...:|. .:||..:||:|:|..|:|..:|.:|:|.|.:.|..|...
Zfish   912 ---CQ--------QSVDPSSYPQPT-TQDLASFWDLLQLAIEDVRVKFQDLQRLKDSGWRLPPEK 964

  Fly   701 AEEPKQPKPKPKISRNMKIKSKAKPSSNLQQFLRKAHANMKKTKVEEPTLEDGLPATSSRHSSPR 765
            .|:.|.|.|.||           ||...:...||                     |.|:..|...
Zfish   965 KEDKKVPPPLPK-----------KPIGGVTGSLR---------------------ADSTAESGGM 997

  Fly   766 VIVVRNRRSFSPARTVLRMSTGEGRQSIAPNALLKSAILAAAEQNAA 812
            ::|.|.|.  .|.|. ..:..|:.::......||::...|:..||:|
Zfish   998 LVVSRGRS--LPERE-KSLDVGDRQKLETRRRLLQTKRSASFRQNSA 1041

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
marsNP_610878.1 PHA03247 <131..342 CDD:223021 50/256 (20%)
GKAP <580..>694 CDD:460897 31/113 (27%)
dlgap3NP_001038179.1 GKAP 684..1059 CDD:460897 95/442 (21%)

Return to query results.
Submit another query.