DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment drk and RVS167

DIOPT Version :9

Sequence 1:NP_476858.1 Gene:drk / 36497 FlyBaseID:FBgn0004638 Length:211 Species:Drosophila melanogaster
Sequence 2:NP_010676.1 Gene:RVS167 / 851996 SGDID:S000002796 Length:482 Species:Saccharomyces cerevisiae


Alignment Length:52 Identity:21/52 - (40%)
Similarity:30/52 - (57%) Gaps:2/52 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   157 VQALYDFVPQESGELDFRRGDVITVTDRSDE--NWWNGEIGNRKGIFPATYV 206
            |.||||:..|.:|:|.|..|.||.:..|:.:  .||.|....::|:||..||
Yeast   426 VTALYDYQAQAAGDLSFPAGAVIEIVQRTPDVNEWWTGRYNGQQGVFPGNYV 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
drkNP_476858.1 SH3_GRB2_like_N 2..53 CDD:212738
SH2_Grb2_like 56..149 CDD:199828
SH3_GRB2_like_C 156..208 CDD:212739 21/52 (40%)
RVS167NP_010676.1 BAR_Rvs167p 29..245 CDD:153283
SH3 425..478 CDD:418401 21/52 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 60 1.000 Domainoid score I2555
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm46831
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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