DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment drk and nck1a

DIOPT Version :10

Sequence 1:NP_476858.1 Gene:drk / 36497 FlyBaseID:FBgn0004638 Length:211 Species:Drosophila melanogaster
Sequence 2:XP_693006.3 Gene:nck1a / 564584 ZFINID:ZDB-GENE-070912-547 Length:310 Species:Danio rerio


Alignment Length:170 Identity:55/170 - (32%)
Similarity:92/170 - (54%) Gaps:32/170 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 AKHDFSATADDELSFRKTQILKILNM-EDDSNWYRAELD-GKEGLIPSNYIEM------------ 55
            |.:.||:...:||:|.|.:::.:|.. |:|..|::...: |:.||:|.||:.:            
Zfish   130 ALYHFSSGNVEELNFNKYELMDVLEKPENDPEWWKCRKENGQVGLVPKNYVTVVQKTHKELGISG 194

  Fly    56 ---KNHD-------------WYYGRITRADAEKLLSNKH-EGAFLIRISESSPGDFSLSVKCPDG 103
               .|:|             ||||::||..||.:|:.:. :|.||||.|||.|.|||:|:|....
Zfish   195 PHPSNYDIKPSMDGKFGGKQWYYGKLTRHQAEMVLNQRGVDGDFLIRDSESMPNDFSISLKALYK 259

  Fly   104 VQHFKVLRDAQSKFFLWVVKFNSLNELVEYHRTASVSRSQ 143
            .:|||||.: ...|.:...||:::.:|||:::.|.:..|:
Zfish   260 NKHFKVLLN-DGFFCIGQRKFSTMEDLVEHYKKAPIFTSE 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
drkNP_476858.1 SH3_GRB2_like_N 2..53 CDD:212738 16/49 (33%)
SH2_Grb2_like 56..149 CDD:199828 38/102 (37%)
SH3_GRB2_like_C 156..208 CDD:212739
nck1aXP_693006.3 SH3_Nck1_2 42..96 CDD:212834
SH3 126..182 CDD:473055 17/51 (33%)
SH2 213..309 CDD:472789 36/87 (41%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.