DRSC/TRiP Functional Genomics Resources

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Protein Alignment drk and grapb

DIOPT Version :9

Sequence 1:NP_476858.1 Gene:drk / 36497 FlyBaseID:FBgn0004638 Length:211 Species:Drosophila melanogaster
Sequence 2:NP_001025251.2 Gene:grapb / 555184 ZFINID:ZDB-GENE-050913-4 Length:214 Species:Danio rerio


Alignment Length:216 Identity:105/216 - (48%)
Similarity:137/216 - (63%) Gaps:8/216 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEAIAKHDFSATADDELSFRKTQILKILNMEDDSNWYRAELDGKEGLIPSNYIEMKNHDWYYGRI 65
            |||.|.:.|.||..|||||:|.:|||:.||:||.|||.|||.|:.|.:|.|||.::.|.|:.|.|
Zfish     1 MEAEALYSFRATECDELSFQKGEILKVTNMDDDPNWYTAELLGRRGYVPKNYINVRPHTWFVGGI 65

  Fly    66 TRADAEKLLSNKHEGAFLIRISESSPGDFSLSVKCPDGVQHFKVLRDAQSKFFLWVVKFNSLNEL 130
            :|..||..|.....||||||.|||:||:||:||...|.|||||||:|...::|:|...|:|||:|
Zfish    66 SRQAAENRLRPLECGAFLIRESESTPGEFSVSVSYGDHVQHFKVLKDGLGQYFIWDEVFSSLNQL 130

  Fly   131 VEYHRTASVSRSQDVKLRDMIPEEMLVQ-----ALYDFVPQESGELDFRRGDVITVTDRSDENWW 190
            |:::|..|:::.:.|.||:  ||..|.:     |::||.......|.|.|||||.:.|.||...|
Zfish   131 VDFYRINSIAKERTVFLRE--PEGSLARPRHAHAIFDFTSNHVTHLRFLRGDVIDLLDCSDAQCW 193

  Fly   191 NGEIGNRKGIFPATYVTP-YH 210
            .|....|.||||..||.| ||
Zfish   194 RGRCRGRVGIFPPEYVQPIYH 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
drkNP_476858.1 SH3_GRB2_like_N 2..53 CDD:212738 29/50 (58%)
SH2_Grb2_like 56..149 CDD:199828 44/92 (48%)
SH3_GRB2_like_C 156..208 CDD:212739 23/56 (41%)
grapbNP_001025251.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG46063
OrthoDB 1 1.010 - - D1091250at2759
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR46037
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X588
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
88.030

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