DRSC/TRiP Functional Genomics Resources

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Protein Alignment drk and nck1

DIOPT Version :10

Sequence 1:NP_476858.1 Gene:drk / 36497 FlyBaseID:FBgn0004638 Length:211 Species:Drosophila melanogaster
Sequence 2:NP_001008101.1 Gene:nck1 / 493463 XenbaseID:XB-GENE-6085807 Length:377 Species:Xenopus tropicalis


Alignment Length:173 Identity:57/173 - (32%)
Similarity:96/173 - (55%) Gaps:38/173 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 AKHDFSATADDELSFRKTQILKILNM-EDDSNWYRA-ELDGKEGLIPSNYIE-MKN--------- 57
            |.:.||::.::||:|.|.:::.::.. |:|..|::. :.:|..||:|.||:. |:|         
 Frog   197 ALYPFSSSNEEELNFEKGEVMDVIEKPENDPEWWKCRKSNGLVGLVPKNYVTI
MQNFQPTPSFEP 261

  Fly    58 ------------------HDWYYGRITRADAEKLLSNK-HEGAFLIRISESSPGDFSLSVKCPDG 103
                              :.||||::||..||..|:.: :||.||||.|||||.|||:|:|....
 Frog   262 LPPRCDYIGPSASGRFAGNQWYYGKVTRHQAEMALNERGNEGDFLIRDSESSPNDFSVSLKAQGK 326

  Fly   104 VQHFKVLRDAQSKFFLWVV---KFNSLNELVEYHRTASVSRSQ 143
            .:||||    |.|..::.:   ||:::.||||:::.|.:..|:
 Frog   327 NKHFKV----QMKDCMYCIGQRKFSTMEELVEHYKKAPIFTSE 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
drkNP_476858.1 SH3_GRB2_like_N 2..53 CDD:212738 15/49 (31%)
SH2_Grb2_like 56..149 CDD:199828 40/119 (34%)
SH3_GRB2_like_C 156..208 CDD:212739
nck1NP_001008101.1 SH3_Nck1_1 4..62 CDD:212833
SH3_Nck1_2 108..162 CDD:212834
SH3_Nck1_3 193..249 CDD:212837 16/51 (31%)
SH2_Nck1 280..376 CDD:198271 39/90 (43%)
Blue background indicates that the domain is not in the aligned region.

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