DRSC/TRiP Functional Genomics Resources

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Protein Alignment drk and FER

DIOPT Version :10

Sequence 1:NP_476858.1 Gene:drk / 36497 FlyBaseID:FBgn0004638 Length:211 Species:Drosophila melanogaster
Sequence 2:NP_524288.3 Gene:FER / 41118 FlyBaseID:FBgn0000723 Length:1325 Species:Drosophila melanogaster


Alignment Length:200 Identity:48/200 - (24%)
Similarity:81/200 - (40%) Gaps:49/200 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 HDFSATAD--DELSFRKTQILKILNMEDDSNWYRAELDGKEGLIPSNYIEMKNH----------- 58
            |.|.:::.  ||.|.|        ::::|        :.:|.....:.:.||:|           
  Fly   899 HPFESSSGELDENSDR--------DIDND--------EEEEDSASDDVLSMKDHCYCVPSLAASI 947

  Fly    59 -----------DWYYGRITRADAEKLLSNKHEGAFLIRIS-ESSPGDFSLSVKCPDGVQHFKVLR 111
                       :|::|.:.|.:..:||:|  :|.||:|.: .:......||| |.:|.:||.|..
  Fly   948 SLSTNRPLYEEEWFHGVLPREEVVRLLNN--DGDFLVRETIRNEESQIVLSV-CWNGHKHFIVQT 1009

  Fly   112 DAQSKFFLWVVKFNSLNELV--EYHRTASVSRSQDVKLRDMIPEEMLVQALYDFVPQES-GELDF 173
            ..:..|......|.|:.||:  :||....|:......||..:..|....:..|.|..|. |..:|
  Fly  1010 TGEGNFRFEGPPFASIQELIMHQYHSELPVTVKSGAILRRPVCRERWELSNDDVVLLERIGRGNF 1074

  Fly   174 RRGDV 178
              |||
  Fly  1075 --GDV 1077

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
drkNP_476858.1 SH3_GRB2_like_N 2..53 CDD:212738 8/47 (17%)
SH2_Grb2_like 56..149 CDD:199828 29/117 (25%)
SH3_GRB2_like_C 156..208 CDD:212739 7/23 (30%)
FERNP_524288.3 F-BAR_Fes_Fer 7..243 CDD:153341
SH2_Fps_family 953..1039 CDD:198224 25/88 (28%)
PTKc_Fes_like 1067..1315 CDD:270637 5/12 (42%)
Blue background indicates that the domain is not in the aligned region.

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