DRSC/TRiP Functional Genomics Resources

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Protein Alignment drk and sh3gl3b

DIOPT Version :9

Sequence 1:NP_476858.1 Gene:drk / 36497 FlyBaseID:FBgn0004638 Length:211 Species:Drosophila melanogaster
Sequence 2:NP_956475.2 Gene:sh3gl3b / 393150 ZFINID:ZDB-GENE-040121-4 Length:386 Species:Danio rerio


Alignment Length:114 Identity:35/114 - (30%)
Similarity:52/114 - (45%) Gaps:17/114 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 CPDGVQHFKVLRDAQSKFFLWVVKFNSLNELVEYHRTASV-----SRSQDVKLRDMIP--EEMLV 157
            |..|......:.:|.|:.:..||          .||...|     :..:...:.|..|  ::...
Zfish   275 CSSGPSSDTEITEALSEKYAPVV----------VHRPEQVTIKTPTTDKPASINDRAPPLDQPCC 329

  Fly   158 QALYDFVPQESGELDFRRGDVITVTDRSDENWWNGEIGNRKGIFPATYV 206
            ||||.|..:..|||.|:.||:|.:|.:.||||:.|.|..:.|:||..||
Zfish   330 QALYSFQAENQGELGFKEGDIIILTSQIDENWYEGMIRGQSGLFPMNYV 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
drkNP_476858.1 SH3_GRB2_like_N 2..53 CDD:212738
SH2_Grb2_like 56..149 CDD:199828 9/53 (17%)
SH3_GRB2_like_C 156..208 CDD:212739 24/51 (47%)
sh3gl3bNP_956475.2 BAR_Endophilin_A 25..247 CDD:153276
SH3_Endophilin_A 327..381 CDD:212737 24/52 (46%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R571
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.030

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