DRSC/TRiP Functional Genomics Resources

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Protein Alignment drk and Sh3gl3

DIOPT Version :9

Sequence 1:NP_476858.1 Gene:drk / 36497 FlyBaseID:FBgn0004638 Length:211 Species:Drosophila melanogaster
Sequence 2:XP_030098123.1 Gene:Sh3gl3 / 20408 MGIID:700011 Length:361 Species:Mus musculus


Alignment Length:117 Identity:31/117 - (26%)
Similarity:50/117 - (42%) Gaps:41/117 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 VEYHRTAS-------------VSRSQDVKLRDMIP----------------------------EE 154
            ::|||.::             :|.:..|..|:.:|                            ::
Mouse   237 LDYHRQSTEILQELQSKLELRISLASKVPKREFMPKPVNMSSTDANGVGPSSSSKTPGTDTPSDQ 301

  Fly   155 MLVQALYDFVPQESGELDFRRGDVITVTDRSDENWWNGEIGNRKGIFPATYV 206
            ...:.||||.|:..|||.|:.||:||:|::.||||:.|.:....|.||..||
Mouse   302 PCCRGLYDFEPENEGELGFKEGDIITLTNQIDENWYEGMLRGESGFFPINYV 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
drkNP_476858.1 SH3_GRB2_like_N 2..53 CDD:212738
SH2_Grb2_like 56..149 CDD:199828 5/30 (17%)
SH3_GRB2_like_C 156..208 CDD:212739 24/51 (47%)
Sh3gl3XP_030098123.1 BAR_Endophilin_A3 39..261 CDD:153299 4/23 (17%)
SH3_Endophilin_A 302..356 CDD:212737 24/52 (46%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R571
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.940

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