DRSC/TRiP Functional Genomics Resources

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Protein Alignment drk and sem-5

DIOPT Version :9

Sequence 1:NP_476858.1 Gene:drk / 36497 FlyBaseID:FBgn0004638 Length:211 Species:Drosophila melanogaster
Sequence 2:NP_509342.1 Gene:sem-5 / 181055 WormBaseID:WBGene00004774 Length:228 Species:Caenorhabditis elegans


Alignment Length:213 Identity:130/213 - (61%)
Similarity:161/213 - (75%) Gaps:2/213 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEAIAKHDFSATADDELSFRKTQILKILNMEDDSNWYRAELDGKEGLIPSNYIEMKNHDWYYGRI 65
            |||:|:|||.|.:.|||||::...||:||.::|.:||:|||||.||.||||||.|...:||.|:|
 Worm     1 MEAVAEHDFQAGSPDELSFKRGNTLKVLNKDEDPHWYKAELDGNEGFIPSNYIRMTECNWYLGKI 65

  Fly    66 TRADAEKLLSNK--HEGAFLIRISESSPGDFSLSVKCPDGVQHFKVLRDAQSKFFLWVVKFNSLN 128
            ||.|||.||...  .:|.||:|..|||||:||:||:..|.|||||||||...|::||.|||||||
 Worm    66 TRNDAEVLLKKPTVRDGHFLVRQCESSPGEFSISVRFQDSVQHFKVLRDQNGKYYLWAVKFNSLN 130

  Fly   129 ELVEYHRTASVSRSQDVKLRDMIPEEMLVQALYDFVPQESGELDFRRGDVITVTDRSDENWWNGE 193
            |||.|||||||||:..:.|.||..|...||||:||.|||||||.|:||||||:.::.|.|||.|:
 Worm   131 ELVAYHRTASVSRTHTILLSDMNVETKFVQALFDFNPQESGELAFKRGDVITLINKDDPNWWEGQ 195

  Fly   194 IGNRKGIFPATYVTPYHS 211
            :.||:||||:.||.||:|
 Worm   196 LNNRRGIFPSNYVCPYNS 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
drkNP_476858.1 SH3_GRB2_like_N 2..53 CDD:212738 30/50 (60%)
SH2_Grb2_like 56..149 CDD:199828 57/94 (61%)
SH3_GRB2_like_C 156..208 CDD:212739 33/51 (65%)
sem-5NP_509342.1 SH3_GRB2_like_N 2..53 CDD:212738 30/50 (60%)
SH2_Grb2_like 56..151 CDD:199828 57/94 (61%)
SH3_GRB2_like_C 158..210 CDD:212739 33/51 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167664
Domainoid 1 1.000 101 1.000 Domainoid score I4386
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1576
Inparanoid 1 1.050 274 1.000 Inparanoid score I1801
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG46063
OrthoDB 1 1.010 - - D1091250at2759
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 1 1.000 - - oto17724
orthoMCL 1 0.900 - - OOG6_107796
Panther 1 1.100 - - LDO PTHR46037
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R571
SonicParanoid 1 1.000 - - X588
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1514.940

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