DRSC/TRiP Functional Genomics Resources

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Protein Alignment drk and C55C3.4

DIOPT Version :10

Sequence 1:NP_476858.1 Gene:drk / 36497 FlyBaseID:FBgn0004638 Length:211 Species:Drosophila melanogaster
Sequence 2:NP_500846.1 Gene:C55C3.4 / 177346 WormBaseID:WBGene00016954 Length:431 Species:Caenorhabditis elegans


Alignment Length:150 Identity:40/150 - (26%)
Similarity:73/150 - (48%) Gaps:23/150 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 EMKNHDWYYGRITRADAEKLLSNKHEGAFLIRISESSPGD---FSLSV--KCPDGVQHFKVLRDA 113
            ::.:..:|:|.:.|.|.:::| || .|.||:|.||...|:   |.|||  :......|| |:|:|
 Worm     5 DLLHQKYYHGLLPREDIQEML-NK-PGQFLLRTSEPVKGEKRQFVLSVVGEKNTSANHF-VVREA 66

  Fly   114 QSKFFLWVVKFNSLNELVEYHRTASVSRSQDVKLRDMIPEEMLVQALYDFVPQESGELDFRRGDV 178
            ..|.::..:.|.::.|||.::    ||..:....:|...:.:|..|    |.::..||   ..:.
 Worm    67 DHKVYVDKIGFPTIIELVNHY----VSTKESFSTKDGTVKVVLKHA----VERQKWEL---YHED 120

  Fly   179 ITVTDRSDE----NWWNGEI 194
            :.:|.:..|    ..|.|::
 Worm   121 VELTKKLGEGAFGEVWKGKL 140

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
drkNP_476858.1 SH3_GRB2_like_N 2..53 CDD:212738
SH2_Grb2_like 56..149 CDD:199828 30/97 (31%)
SH3_GRB2_like_C 156..208 CDD:212739 9/42 (21%)
C55C3.4NP_500846.1 SH2_Fps_family 4..93 CDD:198224 30/94 (32%)
TyrKc 121..376 CDD:197581 4/19 (21%)
Blue background indicates that the domain is not in the aligned region.

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