DRSC/TRiP Functional Genomics Resources

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Protein Alignment drk and srms

DIOPT Version :9

Sequence 1:NP_476858.1 Gene:drk / 36497 FlyBaseID:FBgn0004638 Length:211 Species:Drosophila melanogaster
Sequence 2:NP_001129722.2 Gene:srms / 100192213 ZFINID:ZDB-GENE-081022-95 Length:492 Species:Danio rerio


Alignment Length:180 Identity:62/180 - (34%)
Similarity:95/180 - (52%) Gaps:25/180 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 AKHDFSATADDELSFRKTQILKILNMEDDSNWYRAELDG--KEGLIPSNYI-----EMKNHDWYY 62
            |..||.|.:::|||.::...|.::....| ..:..:|.|  :.||||:||:     |..|:.|||
Zfish    55 ALFDFVARSEEELSVKEGDKLSVIEKRGD-YVFAKKLTGSLESGLIPANYVAL
LKDEFANYKWYY 118

  Fly    63 GRITRADAEKLL--SNKHEGAFLIRISESSPGDFSLSVKCPDGVQHFKVLRDAQSKFFL-WVVKF 124
            |.|.|..|||||  |....|:||:|||||...::::|.:..:.|.||::.|.....:|: ..:.|
Zfish   119 GNINRQKAEKLLLSSENKTGSFLVRISESHSDEYTISARSENSVFHFRIHRSPIGAYFVSEKISF 183

  Fly   125 NSLNELVEYHRTASVSRS--------QDVKLRDMIP------EEMLVQAL 160
            .:|:||:.|::..|.|..        |..:|.||.|      |.|||:.|
Zfish   184 GTLDELIRYYQQNS
RSLGCHIDQPCVQRRELFDMEPWERPREEFMLVKKL 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
drkNP_476858.1 SH3_GRB2_like_N 2..53 CDD:212738 16/49 (33%)
SH2_Grb2_like 56..149 CDD:199828 36/103 (35%)
SH3_GRB2_like_C 156..208 CDD:212739 3/5 (60%)
srmsNP_001129722.2 SH3 52..106 CDD:302595 17/51 (33%)
SH2 114..197 CDD:214585 31/82 (38%)
PKc_like 220..481 CDD:304357 5/14 (36%)
STYKc 229..478 CDD:214568 3/5 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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