DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bbc and CPT1

DIOPT Version :10

Sequence 1:NP_610877.2 Gene:bbc / 36496 FlyBaseID:FBgn0033844 Length:417 Species:Drosophila melanogaster
Sequence 2:NP_014269.4 Gene:CPT1 / 855593 SGDID:S000005074 Length:393 Species:Saccharomyces cerevisiae


Alignment Length:372 Identity:101/372 - (27%)
Similarity:162/372 - (43%) Gaps:61/372 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LRKLSEHKYSCFSVSLL-DPLLQPWWNWLVAQTPLWLAPNLITIVG---LILNVVTTLILICYSP 77
            |..|..:||.....|.| :.:|:|:|.......|||:||||:|::|   :|.||:|||.   |.|
Yeast    10 LGNLKLYKYQSDDRSFLSNHVLRPFWRKFATIFPLWMAPNLVTLLGFCFIIFNVLTTLY---YDP 71

  Fly    78 NGVEAPPRWTCLLCALGLFIYQSLDSIDGKQARRTNTSSPLGELFDHGCDSISTVFVALSACISC 142
            ...:..||||....|:|||:||:.|:.||..||||....||||||||..|||:|....:..|...
Yeast    72 YFDQESPRWTYFSYAIGLFLYQTFDACDGMHARRTGQQGPLGELFDHCIDSINTTLSMIPVCSMT 136

  Fly   143 QLGHYPNWLFFQCFCAIALFYCAHWQTYVSGTMRFGRIDVTEAQFSIIAIHLVSAAL-GPE-IWL 205
            .:| |.....|..|..:..||.:.|:.|.:..:.............::.|..::..: ||: ||.
Yeast   137 GMG-YTYMTIFSQFAILCSFYLSTWEEYHTHKLYLAEFCGPVEGIIVLCISFIAVGIYGPQTIWH 200

  Fly   206 TKIPIVGLSWN---------YTILVFITFGYTLNII----NFLKMFTQGGSGKNGSSVAGTSVLS 257
            ||  :...||.         :.:..|.|.....||:    |.::.: :..|.|:.:.......:|
Yeast   201 TK--VAQFSWQDFVFDVETVHLMYAFCTGALIFNIVTAHTNVVRYY-ESQSTKSATPSKTAENIS 262

  Fly   258 PSIP------------LTLVVLPALMIAQKSPQNLFTEHASVYIMAFGMVAAKVTNKLVIAHMTK 310
            .::.            .|||::....|            :...|::.|...|.|..:::|||:|.
Yeast   263 KAVNGLLPFFAYFSSIFTLVLIQPSFI------------SLALILSIGFSVAFVVGRMIIAHLTM 315

  Fly   311 AEMEYLDWSLLGPSLLFLNQYFNCIVPE----------IWL-LWFTL 346
            .....:::..|.|::..:...|...|.:          :|: |..||
Yeast   316 QPFPMVNFPFLIPTIQLVLYAFMVYVLDYQKGSIVSALVWMGLGLTL 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bbcNP_610877.2 PRK10832 20..375 CDD:469774 100/369 (27%)
CPT1NP_014269.4 PRK10832 1..391 CDD:469774 101/372 (27%)

Return to query results.
Submit another query.