DRSC/TRiP Functional Genomics Resources

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Protein Alignment bbc and selenoi

DIOPT Version :9

Sequence 1:NP_001246300.1 Gene:bbc / 36496 FlyBaseID:FBgn0033844 Length:417 Species:Drosophila melanogaster
Sequence 2:NP_001004832.3 Gene:selenoi / 448097 XenbaseID:XB-GENE-991194 Length:400 Species:Xenopus tropicalis


Alignment Length:411 Identity:115/411 - (27%)
Similarity:186/411 - (45%) Gaps:54/411 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LSAQQLRKLSEHKYSCFSVSLLD-PLLQPWWNWLVAQTPLWLAPNLITIVGLILNVVTTLILICY 75
            :|.:||....::|||....:.|. .::.|:||.:|...|.||||||||..|.:|.|.|.|::..:
 Frog     6 VSPEQLAGFDKYKYSAVDTNPLSLYVMHPFWNSIVRFFPTWLAPNLITFSGFLLLVFTFLLMAFF 70

  Fly    76 SPN------GVEAPPRWTCLLCALGLFIYQSLDSIDGKQARRTNTSSPLGELFDHGCDSISTVF- 133
            .|:      |.|..|.|..::..|..|...:||.:|||||||||:|:|||||||||.||.:.:| 
 Frog    71 DPDFYASAPGQEHVPNWVWIVAGLLNFTAYTLDGVDGKQARRTNSSTPLGELFDHGLDSWACIFF 135

  Fly   134 ------------VALSACISCQLGHYPNWLFFQCFCAIALFYCAHWQTYVSGTMRFGRIDVTEAQ 186
                        ..:||.:          |:|..:..:..|..:||:.|.:|.: |.......:|
 Frog   136 VVTVYSIFGRGETGVSAVV----------LYFLLWVVLFSFILSHWEKYNTGIL-FLPWGYDLSQ 189

  Fly   187 FSIIAIHLVSAALGPEIWLTKLPHFNCESR--FLPIYVACGVDLILALRYTKCILTEGCGKNGSS 249
            .:|..::||:|.:|.|.|...:. ||...|  |..:.|.|.|.:.|.:.......    |...::
 Frog   190 VTISCVYLVTAVVGVETWYQPVV-FNILYRDLFTTMIVGCAVCVTLPMSLYNVFK----GYRNNT 249

  Fly   250 VAGTSVLSPSIPL----TLVVLPALMIAQKSPQNLFTEHASVYIMAFGMVAAKVTNKLVIAHMTK 310
            :..||:....:|:    .|.:|..|.|. .||..:...|..::....|...|.:|.:|::..|:.
 Frog   250 LKHTSLYEAMLPIISPVLLFILSTLWIL-ASPSKILEHHPRLFYFMVGTTFANITCQLIVCQMSN 313

  Fly   311 AEMEYLDWSLLGPSLLFLNQYFNCIVP--EIWLLWFTLIWGTQDLLRYCAQVCLEICQHLRIDLF 373
            .....|.| ||.|..|.:....:.:.|  |...|....:..|...:.|...|..::.:|..|   
 Frog   314 TRCRPLSW-LLIPLTLAVVVSLSTVTPRDETLALVLLTVLVTLAHIHYGVNVVNQLSKHFNI--- 374

  Fly   374 RIPYTPKGATPHPATASVSSQ 394
             :|::.:    .|:|. :..:
 Frog   375 -LPFSLR----KPSTDULEEE 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bbcNP_001246300.1 CDP-OH_P_transf 12..328 CDD:294308 104/341 (30%)
selenoiNP_001004832.3 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D847100at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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