DRSC/TRiP Functional Genomics Resources

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Protein Alignment bbc and Chpt1

DIOPT Version :10

Sequence 1:NP_610877.2 Gene:bbc / 36496 FlyBaseID:FBgn0033844 Length:417 Species:Drosophila melanogaster
Sequence 2:XP_006241292.1 Gene:Chpt1 / 362866 RGDID:1359283 Length:468 Species:Rattus norvegicus


Alignment Length:383 Identity:190/383 - (49%)
Similarity:262/383 - (68%) Gaps:2/383 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LSAQQLRKLSEHKYSCFSVSLLDPLLQPWWNWLVAQTPLWLAPNLITIVGLILNVVTTLILICYS 76
            |||.|||:|.:|:||....||.:|.||.:|.||:...|||:|||.||:.||.:|:.|||:||.|.
  Rat    21 LSAAQLRRLEDHRYSAAGESLFEPPLQLFWTWLLQWIPLWIAPNTITLFGLAINLFTTLVLIFYC 85

  Fly    77 PNGVEAPPRWTCLLCALGLFIYQSLDSIDGKQARRTNTSSPLGELFDHGCDSISTVFVALSACIS 141
            |...|..|.||.||||||||||||||:||||||||||:.|||||||||||||:||||:|:.|.|:
  Rat    86 PTVTEEAPYWTYLLCALGLFIYQSLDAIDGKQARRTNSCSPLGELFDHGCDSLSTVFMAIGASIA 150

  Fly   142 CQLGHYPNWLFFQCFCAIALFYCAHWQTYVSGTMRFGRIDVTEAQFSIIAIHLVSAALGPEIWLT 206
            .:||.:|:||||..|..:.:||||||||||||.:||||:||||.|.:::.:.|:|...|..:|..
  Rat   151 VRLGTHPDWLFFCSFVGMFMFYCAHWQTYVSGVLRFGRVDVTEIQVALVIVFLLSTFGGAMMWDY 215

  Fly   207 KIPIVGLSWNYTILVFITFGYTLNIINFLKMFTQGGSGKNGSSVAGTSVLSPSIPLTLVVLPALM 271
            .|||:.:......::.:..|...:..|:..:...||.|||||::||||||||.:.:.|:::.|:|
  Rat   216 TIPILEIKLKILPVLGVVGGLIFSCSNYFHVILHGGVGKNGSTIAGTSVLSPGLHIGLIIILAIM 280

  Fly   272 IAQKSPQNLFTEHASVYIMAFGMVAAKVTNKLVIAHMTKAEMEYLDWSLLGPSLLFLNQYFNCIV 336
            |.:||..|:|.:|..:|.:.||.|.|||..|||||||||:|:...|...:||.||||:||||..:
  Rat   281 IYKKSATNVFEKHPCLYTLMFGCVFAKVAQKLVIAHMTKSELYLQDTVFIGPGLLFLDQYFNNFI 345

  Fly   337 PEIWLLWFTLIWGTQDLLRYCAQVCLEICQHLRIDLFRIPY--TPKGATPHPATASVS 392
            .|..:||..::..:.|::.|.:.:||:|.:||.:.:|:..|  .|:.....|.::.||
  Rat   346 DEYVVLWIAMVITSFDMMIYFSSLCLQISRHLHLSIFKTSYQQAPEQKLVGPCSSRVS 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bbcNP_610877.2 PRK10832 20..375 CDD:469774 179/354 (51%)
Chpt1XP_006241292.1 PRK10832 19..382 CDD:469774 184/360 (51%)

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