DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bbc and chpt1

DIOPT Version :9

Sequence 1:NP_001246300.1 Gene:bbc / 36496 FlyBaseID:FBgn0033844 Length:417 Species:Drosophila melanogaster
Sequence 2:NP_997789.1 Gene:chpt1 / 322605 ZFINID:ZDB-GENE-030131-1325 Length:382 Species:Danio rerio


Alignment Length:370 Identity:195/370 - (52%)
Similarity:256/370 - (69%) Gaps:2/370 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LSAQQLRKLSEHKYSCFSVSLLDPLLQPWWNWLVAQTPLWLAPNLITIVGLILNVVTTLILICYS 76
            |||.||::|.|||||....||.:|..|.:|||||.|.|.|:|||.:|.:||::||:||:||:.||
Zfish    10 LSAVQLKRLEEHKYSAAGRSLFEPPCQIYWNWLVQQIPTWVAPNTLTTIGLVINVITTVILVYYS 74

  Fly    77 PNGVEAPPRWTCLLCALGLFIYQSLDSIDGKQARRTNTSSPLGELFDHGCDSISTVFVALSACIS 141
            |...|..|.|...|.|||||||||||:||||||||||:||.||||||||||::||||||:..||.
Zfish    75 PTATEEVPGWAFFLSALGLFIYQSLDAIDGKQARRTNSSSALGELFDHGCDAVSTVFVAVGTCIC 139

  Fly   142 CQLGHYPNWLFFQCFCAIALFYCAHWQTYVSGTMRFGRIDVTEAQFSIIAIHLVSAALGPEIWLT 206
            |.:|.||||:||..|..:.:|:|||||||||||:|||.:||||.|.:||.::|::|..|...|..
Zfish   140 CGIGAYPNWMFFCGFVGMFMFFCAHWQTYVSGTLRFGLVDVTEVQIAIIIMYLLTAFTGVSFWEM 204

  Fly   207 KLPHFNCESRFLPIYVACGVDLILALRYTKCILTEGCGKNGSSVAGTSVLSPSIPLTLVVLPALM 271
            ::|......:..||....|..|.....|...|:..|.|||||:||.||||:|.:.:.|::..|.:
Zfish   205 RVPVLGVNLQTFPILGIIGGFLYSTYNYFFVIMNGGVGKNGSTVADTSVLTPGLHIGLILTLAFI 269

  Fly   272 IAQKSPQNLFTEHASVYIMAFGMVAAKVTNKLVIAHMTKAEMEYLDWSLLGPSLLFLNQYFNCIV 336
            |.:||..:||..|..:|::.||||.||::||||:|||||:|:...|.:.:||.|||||||||..:
Zfish   270 IFKKSSSHLFEHHPCLYVLTFGMVIAKISNKLVVAHMTKSELHLQDTAFIGPGLLFLNQYFNSYI 334

  Fly   337 PEIWLLWFTLIWGTQDLLRYCAQVCLEICQHLRIDLFRIPYTPKG 381
            .|..:||..::....||:|||..|||:|..||||.:|.|  :|:|
Zfish   335 DEHIVLWIAMVLSLVDLVRYCTAVCLQIASHLRIRVFSI--SPQG 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bbcNP_001246300.1 CDP-OH_P_transf 12..328 CDD:294308 168/315 (53%)
chpt1NP_997789.1 CDP-OH_P_transf 15..376 CDD:294308 189/362 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170579865
Domainoid 1 1.000 262 1.000 Domainoid score I1903
eggNOG 1 0.900 - - E1_COG5050
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 427 1.000 Inparanoid score I1721
OMA 1 1.010 - - QHG53654
OrthoDB 1 1.010 - - D399621at33208
OrthoFinder 1 1.000 - - FOG0002101
OrthoInspector 1 1.000 - - otm25262
orthoMCL 1 0.900 - - OOG6_100740
Panther 1 1.100 - - LDO PTHR10414
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1820
SonicParanoid 1 1.000 - - X1064
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.800

Return to query results.
Submit another query.