DRSC/TRiP Functional Genomics Resources

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Protein Alignment bbc and Selenoi

DIOPT Version :9

Sequence 1:NP_001246300.1 Gene:bbc / 36496 FlyBaseID:FBgn0033844 Length:417 Species:Drosophila melanogaster
Sequence 2:NP_081928.2 Gene:Selenoi / 28042 MGIID:107898 Length:398 Species:Mus musculus


Alignment Length:393 Identity:113/393 - (28%)
Similarity:182/393 - (46%) Gaps:47/393 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LSAQQLRKLSEHKYSCFSVSLLD-PLLQPWWNWLVAQTPLWLAPNLITIVGLILNVVTTLILICY 75
            :|.:||....::|||....:.|. .::.|:||.:|...|.||||||||..|.:|.|...|:|..:
Mouse     7 VSPEQLSGFDKYKYSALDTNPLSLYIMHPFWNTIVKVFPTWLAPNLITFSGFMLLVFNFLLLTYF 71

  Fly    76 SPN------GVEAPPRWTCLLCALGLFIYQSLDSIDGKQARRTNTSSPLGELFDHGCDSISTVFV 134
            .|:      |.:..|.|..::..:..|...:||.:|||||||||:|:|||||||||.||.|.|:.
Mouse    72 DPDFYASAPGHKHVPDWVWIVVGILNFAAYTLDGVDGKQARRTNSSTPLGELFDHGLDSWSCVYF 136

  Fly   135 ALSACISCQLGHYPNW-----LFFQCFCAIALFYCAHWQTYVSGT--MRFGRIDVTEAQFSIIAI 192
            .::  :....|..|..     |:...:..:..|..:||:.|.:|.  :.:| .|:  :|.:|..:
Mouse   137 VVT--VYSIFGRGPTGVSVFVLYLLLWVVLFSFILSHWEKYNTGVLFLPWG-YDI--SQVTISFV 196

  Fly   193 HLVSAALGPEIWLTK-LPHFNCESRFLPIYVACGVDLIL---ALRYTKCILTEGCGKNGSSVAGT 253
            ::|:|.:|.|.|... |.:|.....|..:.:.|.:.:.|   .|.:.:...:..........|..
Mouse   197 YIVTAVVGVEAWYEPFLFNFLYRDLFTAMIIGCALCVTLPMSLLNFFRSYKSNTLKHKSVYEAMV 261

  Fly   254 SVLSPSIPLTLVVLPALMIAQKSPQNLFTEHASVYIMAFGMVAAKVTNKLVIAHMTKAEMEYLDW 318
            ...||.:..||..:..|.    ||.::...|..::....|...|.:|.:|::..|:......|:|
Mouse   262 PFFSPCLLFTLCTVWILW----SPSDILEIHPRIFYFMVGTAFANITCQLIVCQMSSTRCPTLNW 322

  Fly   319 SLLGPSLLFLNQYFNCIVP------EIWLLW-----FTLIWGTQDLLRYCAQVCLEICQHLRIDL 372
            .|| |.||.:..   .||.      |..||:     |||..     :.|..||..::.:|.:|..
Mouse   323 LLL-PLLLVVAA---VIVGAATSRLESALLYTLTAAFTLAH-----IHYGVQVVKQLSRHFQIYP 378

  Fly   373 FRI 375
            |.:
Mouse   379 FSL 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bbcNP_001246300.1 CDP-OH_P_transf 12..328 CDD:294308 99/333 (30%)
SelenoiNP_081928.2 CDP-OH_P_transf 6..>312 CDD:294308 91/313 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5050
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D847100at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1820
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.850

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