DRSC/TRiP Functional Genomics Resources

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Protein Alignment bbc and Selenoi

DIOPT Version :10

Sequence 1:NP_610877.2 Gene:bbc / 36496 FlyBaseID:FBgn0033844 Length:417 Species:Drosophila melanogaster
Sequence 2:NP_081928.2 Gene:Selenoi / 28042 MGIID:107898 Length:398 Species:Mus musculus


Alignment Length:401 Identity:113/401 - (28%)
Similarity:183/401 - (45%) Gaps:63/401 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LSAQQLRKLSEHKYSCFSVSLLD-PLLQPWWNWLVAQTPLWLAPNLITIVGLILNVVTTLILICY 75
            :|.:||....::|||....:.|. .::.|:||.:|...|.||||||||..|.:|.|...|:|..:
Mouse     7 VSPEQLSGFDKYKYSALDTNPLSLYIMHPFWNTIVKVFPTWLAPNLITFSGFMLLVFNFLLLTYF 71

  Fly    76 SPN------GVEAPPRWTCLLCALGLFIYQSLDSIDGKQARRTNTSSPLGELFDHGCDSISTVFV 134
            .|:      |.:..|.|..::..:..|...:||.:|||||||||:|:|||||||||.||.|.|:.
Mouse    72 DPDFYASAPGHKHVPDWVWIVVGILNFAAYTLDGVDGKQARRTNSSTPLGELFDHGLDSWSCVYF 136

  Fly   135 ALSACISCQLGHYPNW-----LFFQCFCAIALFYCAHWQTYVSGT--MRFGRIDVTEAQFSIIAI 192
            .::  :....|..|..     |:...:..:..|..:||:.|.:|.  :.:| .|:  :|.:|..:
Mouse   137 VVT--VYSIFGRGPTGVSVFVLYLLLWVVLFSFILSHWEKYNTGVLFLPWG-YDI--SQVTISFV 196

  Fly   193 HLVSAALGPEIW------------LTKIPIVGLSWNYTILVFITFGYTLNIINFLKMFTQGGSGK 245
            ::|:|.:|.|.|            |....|:|.:...|:        .::::||.:.:.......
Mouse   197 YIVTAVVGVEAWYEPFLFNFLYRDLFTAMIIGCALCVTL--------PMSLLNFFRSYKSNTLKH 253

  Fly   246 NGSSVAGTSVLSPSIPLTLVVLPALMIAQKSPQNLFTEHASVYIMAFGMVAAKVTNKLVIAHMTK 310
            .....|.....||.:..||..:..|.    ||.::...|..::....|...|.:|.:|::..|:.
Mouse   254 KSVYEAMVPFFSPCLLFTLCTVWILW----SPSDILEIHPRIFYFMVGTAFANITCQLIVCQMSS 314

  Fly   311 AEMEYLDWSLLGPSLLFLNQYFNCIVP------EIWLLW-----FTLIWGTQDLLRYCAQVCLEI 364
            .....|:|.|| |.||.:..   .||.      |..||:     |||..     :.|..||..::
Mouse   315 TRCPTLNWLLL-PLLLVVAA---VIVGAATSRLESALLYTLTAAFTLAH-----IHYGVQVVKQL 370

  Fly   365 CQHLRIDLFRI 375
            .:|.:|..|.:
Mouse   371 SRHFQIYPFSL 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bbcNP_610877.2 PRK10832 20..375 CDD:469774 110/391 (28%)
SelenoiNP_081928.2 PRK10832 6..>312 CDD:469774 91/321 (28%)

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