DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cid and HHT1

DIOPT Version :10

Sequence 1:NP_523730.2 Gene:cid / 36495 FlyBaseID:FBgn0040477 Length:225 Species:Drosophila melanogaster
Sequence 2:NP_009564.1 Gene:HHT1 / 852295 SGDID:S000000214 Length:136 Species:Saccharomyces cerevisiae


Alignment Length:167 Identity:50/167 - (29%)
Similarity:64/167 - (38%) Gaps:49/167 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 RRSSTLRRDAGRRQP-------AARDSSTSGEEEDQENRYPTTRSPQTRRMTVQQESKTRAAGPV 112
            |...|.|:..|.:.|       |||.|:.|.....:.:||                    ..|.|
Yeast     3 RTKQTARKSTGGKAPRKQLASKAARKSAPSTGGVKKPHRY--------------------KPGTV 47

  Fly   113 AAQNQTRRRKAANPMSRAKRMDREIRRLQHHPGTLIPKLPFSRLVREFIVKYSDDEPLRVTEGAL 177
            |.                    |||||.|.....||.||||.|||||....:..|  ||....|:
Yeast    48 AL--------------------REIRRFQKSTELLIRKLPFQRLVREIAQDFKTD--LRFQSSAI 90

  Fly   178 LAMQESCEMYLTQRLADSYMLTKHRNRVTLEVRDMAL 214
            .|:|||.|.||.....|:.:...|..|||::.:|:.|
Yeast    91 GALQESVEAYLVSLFEDTNLAAIHAKRVTIQKKDIKL 127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cidNP_523730.2 HFD_SF 126..219 CDD:480273 35/89 (39%)
HHT1NP_009564.1 PTZ00018 1..136 CDD:185400 50/167 (30%)

Return to query results.
Submit another query.