DRSC/TRiP Functional Genomics Resources

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Protein Alignment cid and AT1G75600

DIOPT Version :9

Sequence 1:NP_523730.2 Gene:cid / 36495 FlyBaseID:FBgn0040477 Length:225 Species:Drosophila melanogaster
Sequence 2:NP_177690.1 Gene:AT1G75600 / 843895 AraportID:AT1G75600 Length:136 Species:Arabidopsis thaliana


Alignment Length:180 Identity:55/180 - (30%)
Similarity:69/180 - (38%) Gaps:57/180 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 RRSSTLRRDAGRRQP-------AARDSSTSGEEEDQENRYPTT---RSPQTRRMTVQQESKTRAA 109
            |...|.|:..|.:.|       |||.|:            |||   :.|...|           .
plant     3 RTKQTARKSHGGKAPRTLLATKAARKSA------------PTTGGVKKPHRYR-----------P 44

  Fly   110 GPVAAQNQTRRRKAANPMSRAKRMDREIRRLQHHPGTLIPKLPFSRLVREFIVKYSDDEPLRVTE 174
            |.||.                    ||||:.|.....||.||||.|||||....|..|  ||...
plant    45 GTVAL--------------------REIRKYQKSTELLIRKLPFQRLVREIAQDYKTD--LRFQS 87

  Fly   175 GALLAMQESCEMYLTQRLADSYMLTKHRNRVTLEVRDMALMAYICDRGRQ 224
            .|:||:||:.|.||.....|:.:...|..|||:..:|:.|...|  ||.:
plant    88 HAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDVQLARRI--RGER 135

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cidNP_523730.2 H4 135..219 CDD:419976 35/83 (42%)
AT1G75600NP_177690.1 PTZ00018 1..136 CDD:185400 55/180 (31%)
Histone 1..132 CDD:278551 53/175 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1745
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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