DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cid and AT1G75600

DIOPT Version :10

Sequence 1:NP_523730.2 Gene:cid / 36495 FlyBaseID:FBgn0040477 Length:225 Species:Drosophila melanogaster
Sequence 2:NP_177690.1 Gene:AT1G75600 / 843895 AraportID:AT1G75600 Length:136 Species:Arabidopsis thaliana


Alignment Length:180 Identity:55/180 - (30%)
Similarity:69/180 - (38%) Gaps:57/180 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 RRSSTLRRDAGRRQP-------AARDSSTSGEEEDQENRYPTT---RSPQTRRMTVQQESKTRAA 109
            |...|.|:..|.:.|       |||.|:            |||   :.|...|           .
plant     3 RTKQTARKSHGGKAPRTLLATKAARKSA------------PTTGGVKKPHRYR-----------P 44

  Fly   110 GPVAAQNQTRRRKAANPMSRAKRMDREIRRLQHHPGTLIPKLPFSRLVREFIVKYSDDEPLRVTE 174
            |.||.                    ||||:.|.....||.||||.|||||....|..|  ||...
plant    45 GTVAL--------------------REIRKYQKSTELLIRKLPFQRLVREIAQDYKTD--LRFQS 87

  Fly   175 GALLAMQESCEMYLTQRLADSYMLTKHRNRVTLEVRDMALMAYICDRGRQ 224
            .|:||:||:.|.||.....|:.:...|..|||:..:|:.|...|  ||.:
plant    88 HAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDVQLARRI--RGER 135

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cidNP_523730.2 HFD_SF 126..219 CDD:480273 35/92 (38%)
AT1G75600NP_177690.1 PTZ00018 1..136 CDD:185400 55/180 (31%)

Return to query results.
Submit another query.