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Protein Alignment cid and H3c1
DIOPT Version :9
Sequence 1: | NP_523730.2 |
Gene: | cid / 36495 |
FlyBaseID: | FBgn0040477 |
Length: | 225 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_017456209.1 |
Gene: | H3c1 / 679994 |
RGDID: | 1598076 |
Length: | 136 |
Species: | Rattus norvegicus |
Alignment Length: | 148 |
Identity: | 49/148 - (33%) |
Similarity: | 68/148 - (45%) |
Gaps: | 29/148 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 91 RSPQTRRMTV-----QQESKTRAAGPVAAQNQTRRRKAANPMSRAKRMD---------REIRRLQ 141
|:.||.|.:. :::..|:|| ||:|......|:.. |||||.|
Rat 3 RTKQTARKSTGGKAPRKQLATKAA-----------RKSAPATGGVKKPHRYRPGTVALREIRRYQ 56
Fly 142 HHPGTLIPKLPFSRLVREFIVKYSDDEPLRVTEGALLAMQESCEMYLTQRLADSYMLTKHRNRVT 206
.....||.||||.|||||....:..| ||....|::|:||:||.||.....|:.:...|..|||
Rat 57 KSTELLIRKLPFQRLVREIAQDFKTD--LRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVT 119
Fly 207 LEVRDMALMAYICDRGRQ 224
:..:|:.|...| ||.:
Rat 120 IMPKDIQLARRI--RGER 135
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
cid | NP_523730.2 |
H4 |
135..219 |
CDD:419976 |
35/83 (42%) |
H3c1 | XP_017456209.1 |
PTZ00018 |
1..136 |
CDD:185400 |
49/148 (33%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E2759_KOG1745 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.810 |
|
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