DRSC/TRiP Functional Genomics Resources

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Protein Alignment cid and his-70

DIOPT Version :9

Sequence 1:NP_523730.2 Gene:cid / 36495 FlyBaseID:FBgn0040477 Length:225 Species:Drosophila melanogaster
Sequence 2:NP_497812.2 Gene:his-70 / 184006 WormBaseID:WBGene00001944 Length:134 Species:Caenorhabditis elegans


Alignment Length:122 Identity:41/122 - (33%)
Similarity:60/122 - (49%) Gaps:14/122 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 TRAAG---PVAAQNQTRRRKAANPMSRAKRMDREIRRLQHHPGTLIPKLPFSRLVREFIVKYSDD 167
            |:||.   ||..|.:.|.|.::|.:       :|||:.|.....|:.||||.|||||...:...:
 Worm    23 TKAARKVFPVDGQVKKRYRPSSNAL-------KEIRKYQKSTELLVRKLPFQRLVREVAQEIMPN 80

  Fly   168 EPLRVTEGALLAMQESCEMYLTQRLADSYMLTKHRNRVTLEVRDMALMAYICDRGRQ 224
              :|....|:.|:.|:.|.||.....|:.:...|..|||:..:||.|...|  ||.:
 Worm    81 --VRFQSAAIQALHEAAEAYLIGLFEDTNLCAIHAKRVTIMPKDMQLARRI--RGER 133

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cidNP_523730.2 H4 135..219 CDD:419976 29/83 (35%)
his-70NP_497812.2 H4 1..133 CDD:304892 41/120 (34%)
Histone 1..130 CDD:278551 39/117 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1745
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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