DRSC/TRiP Functional Genomics Resources

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Protein Alignment cid and his-69

DIOPT Version :9

Sequence 1:NP_523730.2 Gene:cid / 36495 FlyBaseID:FBgn0040477 Length:225 Species:Drosophila melanogaster
Sequence 2:NP_497811.1 Gene:his-69 / 184005 WormBaseID:WBGene00001943 Length:127 Species:Caenorhabditis elegans


Alignment Length:137 Identity:43/137 - (31%)
Similarity:59/137 - (43%) Gaps:13/137 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 PTTRSPQTRRMTVQQESKTRAAGPVAAQNQTRRRKAANPMSRAKRMDREIRRLQHHPGTLIPKLP 152
            |..::|:.:..|..........|.|...::.|....|.         |||||.|.....|:.|||
 Worm     3 PGGKAPRKQLATKAARKNAIVVGAVKKPHRFRPGTVAL---------REIRRYQKSTDLLLRKLP 58

  Fly   153 FSRLVREFIVKYSDDEPLRVTEGALLAMQESCEMYLTQRLADSYMLTKHRNRVTLEVRDMALMAY 217
            |.|||||.......|  ||....|:.|:||:.|.:|.....|:.:...|..|||:..:||.|...
 Worm    59 FQRLVREIAQDVKQD--LRFQSAAIQALQEASEYFLVGLFEDTNLCAIHAKRVTIMPKDMQLARR 121

  Fly   218 ICDRGRQ 224
            |  ||.:
 Worm   122 I--RGER 126

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cidNP_523730.2 H4 135..219 CDD:419976 33/83 (40%)
his-69NP_497811.1 Histone 1..123 CDD:278551 41/132 (31%)
PTZ00018 4..126 CDD:185400 42/134 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1745
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.704428 Normalized mean entropy S10
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.760

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