DRSC/TRiP Functional Genomics Resources

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Protein Alignment cid and cenpa

DIOPT Version :10

Sequence 1:NP_523730.2 Gene:cid / 36495 FlyBaseID:FBgn0040477 Length:225 Species:Drosophila melanogaster
Sequence 2:NP_001157712.1 Gene:cenpa / 100302659 -ID:- Length:145 Species:Danio rerio


Alignment Length:144 Identity:47/144 - (32%)
Similarity:72/144 - (50%) Gaps:13/144 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 PTTRSPQTRRMTVQQESKTRAAGPVAAQNQTRRR---KAANPMSRAK-----RMDREIRRLQHHP 144
            |...|...|:.:..:.....|:.|..|.::|||.   ..::|..:.|     |...|||:.|...
Zfish     2 PRHTSAHKRKPSTPRRRSPPASLPPPAGSRTRRHSGPSGSSPRKKHKFRPGTRALMEIRKYQKST 66

  Fly   145 GTLIPKLPFSRLVREFIVKYSDDEPLRVTEG-ALLAMQESCEMYLTQRLADSYMLTKHRNRVTLE 208
            |.|:.|.||||||||....:|.:.  .:.:| ||:|:||:.|.::.:..:|:.:...|..||||.
Zfish    67 GLLLRKAPFSRLVREVCQMFSREH--MMWQGYALMALQEAAEAFMVRLFSDANLCAIHAKRVTLF 129

  Fly   209 VRDMALMAYICDRG 222
            .||:.|...|  ||
Zfish   130 PRDIQLARRI--RG 141

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cidNP_523730.2 HFD_SF 126..219 CDD:480273 35/98 (36%)
cenpaNP_001157712.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..54 11/51 (22%)
HFD_H3 47..141 CDD:467036 35/97 (36%)
H3-like 51..145 36/95 (38%)

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