DRSC/TRiP Functional Genomics Resources

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Protein Alignment cbc and CLP1

DIOPT Version :9

Sequence 1:NP_610876.1 Gene:cbc / 36494 FlyBaseID:FBgn0033842 Length:423 Species:Drosophila melanogaster
Sequence 2:NP_014893.1 Gene:CLP1 / 854424 SGDID:S000005776 Length:445 Species:Saccharomyces cerevisiae


Alignment Length:444 Identity:118/444 - (26%)
Similarity:202/444 - (45%) Gaps:67/444 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 QGKDYTLESDSELRFEIEQKDAKVLVSLVSGFAELFGTELVKKKQYEFGVGAKVAIFTYQ----- 64
            :|.|:.::..:|         .|::|.:.||..|:|||||....:|.| ...|..|:..:     
Yeast    30 KGSDWQIDLKAE---------GKLIVKVNSGIVEIFGTELAVDDEYTF-QNWKFPIYAVEETELL 84

  Fly    65 -GCVLHVSGKMDVCYISKETPMVQYV-NCHAALEQFRMEAEEKDRYGPVAMVVGPMDVGKSTLCR 127
             .|....:..:.|    |....::|: |.|..||:.||...|    ||..::||....||::|.|
Yeast    85 WKCPDLTTNTITV----KPNHTMKYIYNLHFMLEKIRMSNFE----GPRVVIVGGSQTGKTSLSR 141

  Fly   128 ILLNYAVRVGR-RPLYADLDVGQGSIAISGSVATILIERPANVE---EGFAKTA---------PL 179
            .|.:||::... :|||.:||..|....:.|.::...|....:.:   .|.:.|:         |:
Yeast   142 TLCSYALKFNAYQPLYINLDPQQPIFTVPGCISATPISDILDAQLPTWGQSLTSGATLLHNKQPM 206

  Fly   180 VYHFGHKSPSGNSVLYNAVVSKMAEVTLQSLNSNKRTKSSGIIINTCGWVK-GSGYAHLLHAAKA 243
            |.:||.:..:.|..||...:|::.:|..|.|:.:.:.:.||.|::|....: ....|.|.|..:.
Yeast   207 VKNFGLERINENKDLYLECISQLGQVVGQRLHLDPQVRRSGCIVDTPSISQLDENLAELHHIIEK 271

  Fly   244 YGACAIFVLDQERLYNELLRDVPK-------GVHVVLLPKSGGVVERSKELRHEARDQRIKEYFY 301
            .....:.||..|.  :.|...|.|       ..::..:||..||.......:...:...|:||||
Yeast   272 LNVNIMLVLCSET--DPLWEKVKKTFGPELGNNNIFFIPKLDGVSAVDDVYKRSLQRTSIREYFY 334

  Fly   302 GNTRAPFYPFSFEVKFQDLRLYKIGAPPLPDSCMPIGMKAEDN---KTKVVAVTPTPA-LIHHVL 362
            |:......|::..|.::||.::|      |.:..       ||   :.::..||.||: |.|.::
Yeast   335 GSLDTALSPYAIGVDYEDLTIWK------PSNVF-------DNEVGRVELFPVTITPSNLQHAII 386

  Fly   363 ALSFAESVEDD--VIGTNVAGFCCVTEVDMERQAVMLLSPQPRPLPPNALLLWS 414
            |::|||...|.  ||.:.:.||..:|||:.:|:.:.:|.|.|..||..|::|.|
Yeast   387 AITFAERRADQATVIKSPILGFALITEVNEKRRKLRVLLPVPGRLPSKAMILTS 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cbcNP_610876.1 CLP1_N 9..102 CDD:293181 25/99 (25%)
CLP1 11..412 CDD:227910 114/434 (26%)
CLP1_P 116..301 CDD:293183 49/205 (24%)
Clp1 309..420 CDD:284274 35/112 (31%)
CLP1NP_014893.1 CLP1 23..445 CDD:227910 118/444 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157346372
Domainoid 1 1.000 51 1.000 Domainoid score I2879
eggNOG 1 0.900 - - E1_COG5623
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 118 1.000 Inparanoid score I1324
Isobase 1 0.950 - 0 Normalized mean entropy S1583
OMA 1 1.010 - - QHG53868
OrthoFinder 1 1.000 - - FOG0003461
OrthoInspector 1 1.000 - - oto99008
orthoMCL 1 0.900 - - OOG6_101503
Panther 1 1.100 - - LDO PTHR12755
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R210
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.740

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