Protein Alignment cbc and GRC3

DIOPT Version :9

• Sequence 1: NP_610876.1
• Gene: cbc / 36494
• FlyBaseID: FBgn0033842
• Length: 423
• Species: Drosophila melanogaster
• Sequence 2: NP_013065.1
• Gene: GRC3 / 850624
• SGDID: S000003958
• Length: 632
• Species: Saccharomyces cerevisiae
• Alignment Length: 454
• Identity: 87/454 - (19%)
• Similarity: 159/454 - (35%)
• Gaps: 122/454 - (26%)

  Fly    66 CVLHV----------SGKM--DVCYISKET----PMVQYVNCHAALEQFRME------------- 101
            |||.|          :|.:  ||.|:.|..    |:.:....|...|..|::
Yeast   163 CVLRVFNSNHTGLLEAGHLYRDVNYLWKPKEPYFPLNERTTYHLLHESDRIQSLSVPGYWSTPLE 227

  Fly   102 ----AEEKDRYGPVAMVVGPMDVGKSTLCRILLNYAVRVGR-------RPLYADLDVGQGSIAIS 155
                :.:...|....||:|..:.||||..|:||....:..|       ..:|.|||.||...::.
Yeast   228 KLYLSHKNAAYDTRIMVIGGKNSGKSTFLRLLLEKFTQDIRDSTTSQEELVYLDLDPGQPEYSLP 292

  Fly   156 GSVA-TILIERPANVEEGFAKTAP----LVYHFGHKSPSGNSVLYNAVVSKMAEVTLQSLNSNKR 215
            .|:: ..::..|.::.:...:.:.    |.::.|..||......|.....|:.:      :..::
Yeast   293 DSISLNKILSSPISLGQHLCQGSNFQTLLQFYAGSSSPQDEPTSYLNCADKLID------HLEEQ 351

  Fly   216 TKSSGIIINTCGWVKGSGYAHLLHAAKAYGACAIFVLD---QERLYNEL---------LRD--VP 266
            ......::|..||:||.|...|.|..:.|....:..|:   .:|..:||         |||  .|
Yeast   352 AFFGTSLLNLPGWIKGFGMQILNHIIRKYKPTHLLFLETANSKRHLDELTIPQSFSTSLRDAYAP 416

  Fly   267 KGVHVVLLPKSGGVVERSKELRH---------EARDQRIKEYF---------------------- 300
            :   ||.:|        :..|.|         :.|..:|...|
Yeast   417 E---VVRVP--------AHSLNHTLSSRFHASQLRTFKILALFHKITQFDYDFAPLLKSAPLQIS 470

  Fly   301 YGNTRAPFYPFSFEVKFQDLRLYKIGAPPLPDSCMPIGMKAEDNKTKVVAVTPTPAL------IH 359
            ||..::......|.::||||....|.: .|..:.:.|...:.::..:|.::...|.|      ..
Yeast   471 YGKGKSGIKGIQFPMEFQDLNPQDIKS-ALEGTVIGIYTYSGEDSLEVKSLNTFPILQSCTSSSK 534

  Fly   360 HVLALSFAESVEDDVIGTNVAGFCCVTEV----DMERQAVMLLSPQPRP----LPPNALLLWSE 415
            :.:.|....|::......|:....|.|::    ..:.|.:::.:....|    ||....:.|.:
Yeast   535 NFITLGLIHSIDTSQQIMNIYVPPCHTQILDKQPEDAQWIIVRNKTETPFCDFLPSPRTITWDD 598

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
cbc	NP_610876.1	CLP1_N	9..102	CDD:293181	13/68 (19%)
		CLP1	11..412	CDD:227910	86/449 (19%)
		CLP1_P	116..301	CDD:293183	48/241 (20%)
		Clp1	309..420	CDD:284274	21/121 (17%)
GRC3	NP_013065.1	Grc3	163..610	CDD:224260	87/454 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	1	0.950	-	0	Normalized mean entropy	S1583
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.860