DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cbc and Nol9

DIOPT Version :10

Sequence 1:NP_610876.1 Gene:cbc / 36494 FlyBaseID:FBgn0033842 Length:423 Species:Drosophila melanogaster
Sequence 2:NP_001365785.1 Gene:Nol9 / 74035 MGIID:1921285 Length:715 Species:Mus musculus


Alignment Length:373 Identity:82/373 - (21%)
Similarity:131/373 - (35%) Gaps:97/373 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 PVAMVVGPMDVGKSTLCRILLNYAVRVGRRPLYADLDVGQGSIAISGSVATILIERPANVEEGFA 174
            ||.::.|..|:||||..|||:|..:.......|.:.|:||......|.||.:.|..|........
Mouse   317 PVILLCGACDIGKSTFNRILINQLLNSIPGVDYLECDLGQTEFTPPGCVALLTITEPLLGPPYTH 381

  Fly   175 KTAP--LVYHFGHKSPSGNSVLYNAVVSKMAEVTLQSLNSNKRTKSSGIIINTCGWVKGSGYAHL 237
            :..|  :||:       |....||. .....::........||  ...:||||.|||..:|...|
Mouse   382 QRKPQRMVYY-------GKMNCYND-YENYIDIVKYVFRDYKR--EFPLIINTMGWVSDNGLRLL 436

  Fly   238 LHAAKAYGACAIFVLDQERLYNELLRDVP--KGVHVVLLPKSGGVVERSK--------------- 285
            :...:......:.     :||::..:..|  ...:|.|   :.|:..:||               
Mouse   437 VDLIRVLSPNYVV-----QLYSDRCKFTPTLTSEYVEL---TDGLYTKSKIKRYRGFEIPEFGDN 493

  Fly   286 -ELRHEARDQRIKEYFYGNTRAPFYPFSFEVK-----------FQDLRLYKIG-----APPLPDS 333
             |..:|.::......|.|:.....:......|           |:||.:  :|     ..|:|:|
Mouse   494 LEFTYEEKESSPLPVFTGHVLLSVHSEFLSSKNEKNRAKYNRIFRDLAV--LGYLSQLMLPVPES 556

  Fly   334 CMP--------IGMKAEDNKTKVVAVTPTPALIHHVLALSFAE-----SVEDDVIG--------- 376
            ..|        :...|...:.....|.||     |:|....|.     .:.||:.|         
Mouse   557 LSPLHSLTPYQVPFSAVAIRVLHADVAPT-----HILYAVNASWVGLCRIVDDMKGYTRGPILLA 616

  Fly   377 ----TNVAGFCCVTEVDMERQAVMLLSPQPRPLPP------NALLLWS 414
                .:..||.....:||:::...:|:    ||||      |.||:.|
Mouse   617 QNPICDCLGFGICRGIDMDKRTYHILT----PLPPEELKTVNCLLVGS 660

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cbcNP_610876.1 CLP1 11..412 CDD:227910 80/369 (22%)
CLP1_P 116..301 CDD:406878 46/204 (23%)
Nol9NP_001365785.1 Nucleolar localization signal. /evidence=ECO:0000250|UniProtKB:Q5SY16 31..47
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 80..133
Clp1 303..664 CDD:477931 82/373 (22%)
CLP1_P 323..>455 CDD:406878 38/146 (26%)
Interaction with LAS1L. /evidence=ECO:0000250|UniProtKB:Q5SY16 496..715 35/176 (20%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.