DRSC/TRiP Functional Genomics Resources

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Protein Alignment cbc and SPOM_SPAC22H10.05C

DIOPT Version :10

Sequence 1:NP_610876.1 Gene:cbc / 36494 FlyBaseID:FBgn0033842 Length:423 Species:Drosophila melanogaster
Sequence 2:NP_593741.1 Gene:SPOM_SPAC22H10.05C / 2541907 PomBaseID:SPAC22H10.05C Length:456 Species:Schizosaccharomyces pombe


Alignment Length:463 Identity:149/463 - (32%)
Similarity:236/463 - (50%) Gaps:62/463 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KDYTLESDSELRFEIEQKDAKVLVSLVSGFAELFGTELVKKKQYEFGVGAKVAIFTYQGCVLHVS 71
            |:..:..:.|.|||::  :..:.:.||||.||.|||||.....|.| ...|.||:|:|||.|.|.
pombe     2 KEIFIPKECEWRFEVD--EPAIQIRLVSGNAEYFGTELALGPPYHF-TRVKGAIYTWQGCTLEVE 63

  Fly    72 GKMDVCYISKETPMVQYVNCHAALEQFRMEAE-----EKDRYGPVAMVVGPMDVGKSTLCRILLN 131
            |:..|.|:::||||..|:|.|.|||..|::||     ::..|||...::||...||:::.:||.:
pombe    64 GEPSVEYVAEETPMSTYLNLHFALEGLRLQAENAAANDESSYGPCVCLIGPRSCGKTSVLKILES 128

  Fly   132 YAVRVGRRPLYADLDVGQGSIAISGSV-----ATILIERPANVEEGF-AKTA----------PLV 180
            ||::..|.|:..:||..|..:|:.||:     ||||..:.|   :|| |.|:          |||
pombe   129 YALKQSRHPICVNLDPTQPMLALPGSISAFHNATILDIQDA---DGFGASTSTGPTHVLAKVPLV 190

  Fly   181 YHFGHKSPSGNSVLYNAVVSKMAEVTLQSLNSNKRTKSSGIIINTCGWVKGS-GYAHLLHA-AKA 243
            |:||..||..|..||...:|::|......::.:|..:.||.:::|....:.: .|..:||: ...
pombe   191 YNFGLDSPLDNPKLYKLSLSRLALAVHSRMSQSKDARVSGCLVDTSSIQENAEKYQDILHSIITD 255

  Fly   244 YGACAIFVLDQERLYNELLRDVPKG--VHVVLLPKSGGVVERSKELRHEARDQRIKEYFYGNTRA 306
            :....|.||..||||:.:.|.....  :.||.:..|||.::|.:|...:.:.:.||:||||:.|.
pombe   256 FRINIIIVLGSERLYSSMKRKYADATWLSVVKVSSSGGCIDREEEWIQQFQARCIKQYFYGDDRM 320

  Fly   307 PFYPFSFEVKFQDLRLYKI-----GAPPLPDSCMPIGMKAE-------DNKTKV----------- 348
            |..|.|..|....|.:|::     ..|  ..|.:|:|.:.|       |..|.:           
pombe   321 PLSPLSMIVDSTQLVVYRVLEASESGP--KSSVLPLGFEEENTQSEKQDGNTSLRLHGKGEFLER 383

  Fly   349 VAVTPTPALIHHVLALSFAESVEDD--VIGTNVAGFCCVTEVDMERQAVMLLSPQPRPLPPNALL 411
            ::......|.:.:||:|.....||:  |:.:.:.|:..|::||..:..:.||||.|..||.|||:
pombe   384 ISTEAMTILQNSILAVSSVGEDEDEATVVDSCIIGYVFVSDVDDVKNRMTLLSPVPEQLPSNALI 448

  Fly   412 L----WSE 415
            :    |.|
pombe   449 MGTCKWQE 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cbcNP_610876.1 CLP1 11..412 CDD:227910 146/450 (32%)
CLP1_P 116..301 CDD:406878 63/204 (31%)
SPOM_SPAC22H10.05CNP_593741.1 CLP1 1..456 CDD:227910 148/461 (32%)

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